Literature DB >> 11244554

A population density approach that facilitates large-scale modeling of neural networks: extension to slow inhibitory synapses.

D Q Nykamp1, D Tranchina.   

Abstract

A previously developed method for efficiently simulating complex networks of integrate-and-fire neurons was specialized to the case in which the neurons have fast unitary postsynaptic conductances. However, inhibitory synaptic conductances are often slower than excitatory ones for cortical neurons, and this difference can have a profound effect on network dynamics that cannot be captured with neurons that have only fast synapses. We thus extend the model to include slow inhibitory synapses. In this model, neurons are grouped into large populations of similar neurons. For each population, we calculate the evolution of a probability density function (PDF), which describes the distribution of neurons over state-space. The population firing rate is given by the flux of probability across the threshold voltage for firing an action potential. In the case of fast synaptic conductances, the PDF was one-dimensional, as the state of a neuron was completely determined by its transmembrane voltage. An exact extension to slow inhibitory synapses increases the dimension of the PDF to two or three, as the state of a neuron now includes the state of its inhibitory synaptic conductance. However, by assuming that the expected value of a neuron's inhibitory conductance is independent of its voltage, we derive a reduction to a one-dimensional PDF and avoid increasing the computational complexity of the problem. We demonstrate that although this assumption is not strictly valid, the results of the reduced model are surprisingly accurate.

Mesh:

Year:  2001        PMID: 11244554     DOI: 10.1162/089976601300014448

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  17 in total

1.  Efficient and accurate time-stepping schemes for integrate-and-fire neuronal networks.

Authors:  M J Shelley; L Tao
Journal:  J Comput Neurosci       Date:  2001 Sep-Oct       Impact factor: 1.621

2.  Coarse-grained reduction and analysis of a network model of cortical response: I. Drifting grating stimuli.

Authors:  Michael Shelley; David McLaughlin
Journal:  J Comput Neurosci       Date:  2002 Mar-Apr       Impact factor: 1.621

3.  An effective kinetic representation of fluctuation-driven neuronal networks with application to simple and complex cells in visual cortex.

Authors:  David Cai; Louis Tao; Michael Shelley; David W McLaughlin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-06       Impact factor: 11.205

4.  An embedded network approach for scale-up of fluctuation-driven systems with preservation of spike information.

Authors:  David Cai; Louis Tao; David W McLaughlin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-20       Impact factor: 11.205

5.  Mathematical Frameworks for Oscillatory Network Dynamics in Neuroscience.

Authors:  Peter Ashwin; Stephen Coombes; Rachel Nicks
Journal:  J Math Neurosci       Date:  2016-01-06       Impact factor: 1.300

6.  Firing rate dynamics in recurrent spiking neural networks with intrinsic and network heterogeneity.

Authors:  Cheng Ly
Journal:  J Comput Neurosci       Date:  2015-10-09       Impact factor: 1.621

7.  Stochastic models of neuronal dynamics.

Authors:  L M Harrison; O David; K J Friston
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-05-29       Impact factor: 6.237

8.  A multivariate population density model of the dLGN/PGN relay.

Authors:  Marco A Huertas; Gregory D Smith
Journal:  J Comput Neurosci       Date:  2006-06-12       Impact factor: 1.621

9.  A kinetic theory approach to capturing interneuronal correlation: the feed-forward case.

Authors:  Chin-Yueh Liu; Duane Q Nykamp
Journal:  J Comput Neurosci       Date:  2008-11-06       Impact factor: 1.621

10.  Beyond mean field theory: statistical field theory for neural networks.

Authors:  Michael A Buice; Carson C Chow
Journal:  J Stat Mech       Date:  2013-03       Impact factor: 2.231

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