Literature DB >> 11237597

Crystal structure of the NADP(H)-dependent ketose reductase from Bemisia argentifolii at 2.3 A resolution.

M J Banfield1, M E Salvucci, E N Baker, C A Smith.   

Abstract

Polyhydric alcohols are widely found in nature and can be accumulated to high concentrations as a protection against a variety of environmental stresses. It is only recently, however, that these molecules have been shown to be active in protection against heat stress, specifically in the use of sorbitol by the silverleaf whitefly, Bemisia argentifolii. We have determined the structure of the enzyme responsible for production of sorbitol in Bemisia argentifolii, NADP(H)-dependent ketose reductase (BaKR), to 2.3 A resolution. The structure was solved by multiwavelength anomalous diffraction (MAD) using the anomalous scattering from two zinc atoms bound in the structure, and was refined to an R factor of 21.9 % (R(free)=25.1 %). BaKR belongs to the medium-chain dehydrogenase family and its structure is the first for the sorbitol dehydrogenase branch of this family. The enzyme is tetrameric, with the monomer having a very similar fold to the alcohol dehydrogenases (ADHs). Although the structure determined is for the apo form, a phosphate ion in the active site marks the likely position for the adenyl phosphate of NADP(H). The catalytic zinc ion is tetrahedrally coordinated to Cys41, His66, Glu67 and a water molecule, in a modification of the zinc site usually found in ADHs. This modified zinc site seems likely to be a conserved feature of the sorbitol dehydrogenase sub-family. Comparisons with other members of the ADH family have also enabled us to model a ternary complex of the enzyme, and suggest how structural differences may influence coenzyme binding and substrate specificity in the reduction of fructose to sorbitol.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11237597     DOI: 10.1006/jmbi.2000.4381

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  7 in total

1.  Structural and kinetic basis for substrate selectivity in Populus tremuloides sinapyl alcohol dehydrogenase.

Authors:  Erin K Bomati; Joseph P Noel
Journal:  Plant Cell       Date:  2005-04-13       Impact factor: 11.277

2.  X-ray crystal structure and small-angle X-ray scattering of sheep liver sorbitol dehydrogenase.

Authors:  Hemant Yennawar; Magda Møller; Richard Gillilan; Neela Yennawar
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-04-13

3.  Molecular characterization of an NADPH-dependent acetoin reductase/2,3-butanediol dehydrogenase from Clostridium beijerinckii NCIMB 8052.

Authors:  John Raedts; Marco A J Siemerink; Mark Levisson; John van der Oost; Servé W M Kengen
Journal:  Appl Environ Microbiol       Date:  2014-01-17       Impact factor: 4.792

4.  Catalytic mechanism of Zn2+-dependent polyol dehydrogenases: kinetic comparison of sheep liver sorbitol dehydrogenase with wild-type and Glu154-->Cys forms of yeast xylitol dehydrogenase.

Authors:  Mario Klimacek; Heidemarie Hellmer; Bernd Nidetzky
Journal:  Biochem J       Date:  2007-06-15       Impact factor: 3.857

5.  Xylitol enhances synthesis of propionate in the colon via cross-feeding of gut microbiota.

Authors:  Shasha Xiang; Kun Ye; Mian Li; Jian Ying; Huanhuan Wang; Jianzhong Han; Lihua Shi; Jie Xiao; Yubiao Shen; Xiao Feng; Xuan Bao; Yiqing Zheng; Yin Ge; Yalin Zhang; Chang Liu; Jie Chen; Yuewen Chen; Shiyi Tian; Xuan Zhu
Journal:  Microbiome       Date:  2021-03-18       Impact factor: 14.650

6.  Characterization of a xylitol dehydrogenase from Aspergillus flavus and its application in l-xylulose production.

Authors:  Anurag Kumar; Jinglin Li; Sanath Kondaveeti; Bakul Singh; Ramasamy Shanmugam; Vipin Chandra Kalia; In-Won Kim; Jung-Kul Lee
Journal:  Front Bioeng Biotechnol       Date:  2022-09-12

7.  Polyol specificity of recombinant Arabidopsis thaliana sorbitol dehydrogenase studied by enzyme kinetics and in silico modeling.

Authors:  M Francisca Aguayo; Juan Carlos Cáceres; Matías Fuentealba; Rodrigo Muñoz; Claudia Stange; Ricardo Cabrera; Michael Handford
Journal:  Front Plant Sci       Date:  2015-02-23       Impact factor: 5.753

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.