Literature DB >> 11223884

Recent progress in the biology, chemistry and structural biology of DNA glycosylases.

O D Schärer1, J Jiricny.   

Abstract

Since the discovery in 1974 of uracil DNA glycosylase (UDG), the first member of the family of enzymes involved in base excision repair (BER), considerable progress has been made in the understanding of DNA glycosylases, the polypeptides that remove damaged or mispaired DNA bases from DNA. We also know the enzymes that act downstream of the glycosylases, in the processing of abasic sites, in gap filling and in DNA ligation. This article covers the most recent developments in our understanding of BER, with particular emphasis on the mechanistic aspects of this process, which have been made possible by the elucidation of the crystal structures of several glycosylases in complex with their respective substrates, substrate analogues and products. The biological importance of individual BER pathways is also being appreciated through the inactivation of key BER genes in knockout mouse models.

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Year:  2001        PMID: 11223884     DOI: 10.1002/1521-1878(200103)23:3<270::AID-BIES1037>3.0.CO;2-J

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  84 in total

1.  A novel type of uracil-DNA glycosylase mediating repair of hydrolytic DNA damage in the extremely thermophilic eubacterium Thermus thermophilus.

Authors:  Vytaute Starkuviene; Hans-Joachim Fritz
Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

2.  Long-patch DNA repair synthesis during base excision repair in mammalian cells.

Authors:  Ulrike Sattler; Philippe Frit; Bernard Salles; Patrick Calsou
Journal:  EMBO Rep       Date:  2003-04       Impact factor: 8.807

3.  Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases.

Authors:  Brandt F Eichman; Eyleen J O'Rourke; J Pablo Radicella; Tom Ellenberger
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

4.  DNA methylation and demethylation in Arabidopsis.

Authors:  Mary Gehring; Steven Henikoff
Journal:  Arabidopsis Book       Date:  2008-05-23

5.  Telomere proteins POT1, TRF1 and TRF2 augment long-patch base excision repair in vitro.

Authors:  Adam S Miller; Lata Balakrishnan; Noah A Buncher; Patricia L Opresko; Robert A Bambara
Journal:  Cell Cycle       Date:  2012-03-01       Impact factor: 4.534

6.  Domain structure of the DEMETER 5-methylcytosine DNA glycosylase.

Authors:  Young Geun Mok; Rie Uzawa; Jiyoon Lee; Gregory M Weiner; Brandt F Eichman; Robert L Fischer; Jin Hoe Huh
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

7.  Genome-wide mapping of 5-hydroxymethylcytosine in three rice cultivars reveals its preferential localization in transcriptionally silent transposable element genes.

Authors:  Xi-liang Wang; Shu-hui Song; Yong-Sheng Wu; Yu-Li Li; Ting-ting Chen; Zhi-yuan Huang; Shuo Liu; Thomas L Dunwell; Gerd P Pfeifer; Jim M Dunwell; Raheema Wamaedeesa; Ihsan Ullah; Yinsheng Wang; Song-nian Hu
Journal:  J Exp Bot       Date:  2015-08-13       Impact factor: 6.992

8.  Expression of the human DNA glycosylase hSMUG1 in Trypanosoma brucei causes DNA damage and interferes with J biosynthesis.

Authors:  Sebastian Ulbert; Mike Cross; Robert J Boorstein; George W Teebor; Piet Borst
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

9.  The transition of closely opposed lesions to double-strand breaks during long-patch base excision repair is prevented by the coordinated action of DNA polymerase delta and Rad27/Fen1.

Authors:  Wenjian Ma; Vijayalakshmi Panduri; Joan F Sterling; Bennett Van Houten; Dmitry A Gordenin; Michael A Resnick
Journal:  Mol Cell Biol       Date:  2008-12-15       Impact factor: 4.272

10.  Rad5 coordinates translesion DNA synthesis pathway by recognizing specific DNA structures in saccharomyces cerevisiae.

Authors:  Qifu Fan; Xin Xu; Xi Zhao; Qian Wang; Wei Xiao; Ying Guo; Yu V Fu
Journal:  Curr Genet       Date:  2018-02-02       Impact factor: 3.886

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