Literature DB >> 11222105

Limitations of chromosome classification by multicolor karyotyping.

C Lee1, D Gisselsson, C Jin, A Nordgren, D O Ferguson, E Blennow, J A Fletcher, C C Morton.   

Abstract

Multicolor karyotyping technologies, such as spectral karyotyping (SKY) (Schröck et al.1996; Liyanage et al. 1996) and multiplex (M-) FISH (Speicher et al. 1996), have proved to be extremely useful in prenatal, postnatal, and cancer cytogenetics. However, these technologies have inherent limitations that, in certain situations, may result in chromosomal misclassification. In this report, we present nine cases, which fall into five categories, in which multicolor karyotyping has produced erroneous interpretations. Most errors appear to have a similar mechanistic basis.

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Year:  2001        PMID: 11222105      PMCID: PMC1275623          DOI: 10.1086/319503

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  18 in total

1.  Detailed characterization of a complex karyotype in a patient with primary plasma cell leukaemia using multicolour spectral karyotyping and micro-FISH.

Authors:  A Nordgren; F Farnebo; M Björkholm; S Sahlén; A Porwit-MacDonald; E Osby; S Kytölä; C Larsson; M Nordenskjöld; E Blennow
Journal:  Hematol J       Date:  2000

2.  Classification accuracy in multiple color fluorescence imaging microscopy.

Authors:  K R Castleman; R Eils; L Morrison; J Piper; K Saracoglu; M A Schulze; M R Speicher
Journal:  Cytometry       Date:  2000-10-01

3.  Karyotyping human chromosomes by combinatorial multi-fluor FISH.

Authors:  M R Speicher; S Gwyn Ballard; D C Ward
Journal:  Nat Genet       Date:  1996-04       Impact factor: 38.330

4.  Multicolor spectral karyotyping of human chromosomes.

Authors:  E Schröck; S du Manoir; T Veldman; B Schoell; J Wienberg; M A Ferguson-Smith; Y Ning; D H Ledbetter; I Bar-Am; D Soenksen; Y Garini; T Ried
Journal:  Science       Date:  1996-07-26       Impact factor: 47.728

5.  Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection.

Authors:  X Y Guan; P S Meltzer; W S Dalton; J M Trent
Journal:  Nat Genet       Date:  1994-10       Impact factor: 38.330

6.  Characterization of chromosome aberrations in salivary gland tumors by FISH, including multicolor COBRA-FISH.

Authors:  C Jin; C Martins; Y Jin; J Wiegant; J Wennerberg; M Dictor; D Gisselsson; B Strömbeck; I Fonseca; F Mitelman; H J Tanke; M Höglund; F Mertens
Journal:  Genes Chromosomes Cancer       Date:  2001-02       Impact factor: 5.006

7.  Evaluation of 24-color multifluor-fluorescence in-situ hybridization (M-FISH) karyotyping by comparison with reverse chromosome painting of the human breast cancer cell line T-47D.

Authors:  Y J Lu; J S Morris; P A Edwards; J Shipley
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

8.  Characterization of three hairy cell leukemia- derived cell lines (ESKOL, JOK-1, and hair-M) by multiplex-FISH, comparative genomic hybridization, FISH, PRINS, and dideoxyPRINS.

Authors:  C Lindbjerg Andersen; M Ostergaard; B Nielsen; B Pedersen; J Koch
Journal:  Cytogenet Cell Genet       Date:  2000

9.  Multiplex-FISH for pre- and postnatal diagnostic applications.

Authors:  S Uhrig; S Schuffenhauer; C Fauth; A Wirtz; C Daumer-Haas; C Apacik; M Cohen; J Müller-Navia; T Cremer; J Murken; M R Speicher
Journal:  Am J Hum Genet       Date:  1999-08       Impact factor: 11.025

10.  Utility of multicolor fluorescent in situ hybridization in clinical cytogenetics.

Authors:  S M Jalal; M E Law
Journal:  Genet Med       Date:  1999 Jul-Aug       Impact factor: 8.822

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  8 in total

1.  Classification of multicolor fluorescence in situ hybridization (M-FISH) images with sparse representation.

Authors:  Hongbao Cao; Hong-Wen Deng; Marilyn Li; Yu-Ping Wang
Journal:  IEEE Trans Nanobioscience       Date:  2012-06       Impact factor: 2.935

2.  A novel approach for efficient extrication of overlapping chromosomes in automated karyotyping.

Authors:  Mousami V Munot; Jayanta Mukherjee; Madhuri Joshi
Journal:  Med Biol Eng Comput       Date:  2013-12       Impact factor: 2.602

3.  Segmentation of multicolor fluorescence in situ hybridization images using an improved fuzzy C-means clustering algorithm by incorporating both spatial and spectral information.

Authors:  Jingyao Li; Dongdong Lin; Yu-Ping Wang
Journal:  J Med Imaging (Bellingham)       Date:  2017-10-10

4.  Chromosomal stability of mesenchymal stromal cells during in vitro culture.

Authors:  Brian G Stultz; Kathleen McGinnis; Elaine E Thompson; Jessica L Lo Surdo; Steven R Bauer; Deborah A Hursh
Journal:  Cytotherapy       Date:  2016-01-15       Impact factor: 5.414

5.  An analysis of complex chromosomal aberrations in seven cases of myelodysplastic syndromes by M-FISH and whole chromosome painting.

Authors:  Jian-Yong Li; Bing Xiao; Li-Juan Chen; Jin-Lan Pan; Wei Xu; Hai-Rong Qiu; Li Li; Yong-Quan Xue
Journal:  Int J Hematol       Date:  2008-11-11       Impact factor: 2.490

6.  Spectral Karyotyping for identification of constitutional chromosomal abnormalities at a national reference laboratory.

Authors:  Arturo Anguiano; Boris T Wang; Shirong R Wang; Fatih Z Boyar; Loretta W Mahon; Mohamed M El Naggar; Peter H Kohn; Mary H Haddadin; Vladimira Sulcova; Adam H Sbeiti; Mervat S Ayad; Beverly J White; Charles M Strom
Journal:  Mol Cytogenet       Date:  2012-01-16       Impact factor: 2.009

7.  halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments.

Authors:  Ksenia Krasheninnikova; Mark Diekhans; Joel Armstrong; Aleksei Dievskii; Benedict Paten; Stephen O'Brien
Journal:  Gigascience       Date:  2020-06-01       Impact factor: 6.524

8.  Multi-Color Spectral Transcript Analysis (SPECTRA) for Phenotypic Characterization of Tumor Cells.

Authors:  Joanne H Hsu; Jingly F Weier; Heinz-Ulrich G Weier; Yuko Ito
Journal:  Biomolecules       Date:  2013-02-11
  8 in total

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