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Literature DB >> 11179893

Satellite tobacco mosaic virus RNA: structure and implications for assembly.

Abstract

The initial appearance of 45% of the single-stranded RNA of satellite tobacco mosaic virus in electron density maps suggested the entire RNA conformation could be delineated. Subsequent work has localized nearly 80% of the RNA as stem-loop elements. Connection of the stem-loops in the most efficient manner produces a persuasive model for the encapsidated RNA. This arrangement has significant implications for virus assembly and for the essential role of RNA.

Entities: Species

Mesh：

Substances：
RNA, Viral

Year: 2001 PMID： 11179893 DOI： 10.1016/s0959-440x(00)00166-4

Source DB: PubMed Journal: Curr Opin Struct Biol ISSN： 0959-440X Impact factor: 6.809

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Cited

32 in total

1. Incorporating global features of RNA motifs in predictions for an ensemble of secondary structures for encapsidated MS2 bacteriophage RNA.

Authors: Samuel Bleckley; Susan J Schroeder
Journal: RNA Date: 2012-05-29 Impact factor: 4.942

2. Electrostatic origin of the genome packing in viruses.

Authors: Vladimir A Belyi; M Muthukumar
Journal: Proc Natl Acad Sci U S A Date: 2006-11-07 Impact factor: 11.205

3. Stochastic kinetics of viral capsid assembly based on detailed protein structures.

Authors: Martin Hemberg; Sophia N Yaliraki; Mauricio Barahona
Journal: Biophys J Date: 2006-02-10 Impact factor: 4.033

Review 4. The icosahedral RNA virus as a grotto: organizing the genome into stalagmites and stalactites.

Authors: Stephen C Harvey; Yingying Zeng; Christine E Heitsch
Journal: J Biol Phys Date: 2013-04-27 Impact factor: 1.365

5. Packaged and Free Satellite Tobacco Mosaic Virus (STMV) RNA Genomes Adopt Distinct Conformational States.

Authors: Bridget C Larman; Elizabeth A Dethoff; Kevin M Weeks
Journal: Biochemistry Date: 2017-04-16 Impact factor: 3.162

6. Ensemble of secondary structures for encapsidated satellite tobacco mosaic virus RNA consistent with chemical probing and crystallography constraints.

Authors: Susan J Schroeder; Jonathan W Stone; Samuel Bleckley; Theodore Gibbons; Deborah M Mathews
Journal: Biophys J Date: 2011-07-06 Impact factor: 4.033

Satellite tobacco mosaic virus RNA: structure and implications for assembly.

1. Incorporating global features of RNA motifs in predictions for an ensemble of secondary structures for encapsidated MS2 bacteriophage RNA.

2. Electrostatic origin of the genome packing in viruses.

3. Stochastic kinetics of viral capsid assembly based on detailed protein structures.

Review 4. The icosahedral RNA virus as a grotto: organizing the genome into stalagmites and stalactites.

5. Packaged and Free Satellite Tobacco Mosaic Virus (STMV) RNA Genomes Adopt Distinct Conformational States.

6. Ensemble of secondary structures for encapsidated satellite tobacco mosaic virus RNA consistent with chemical probing and crystallography constraints.

7. Solving a Levinthal's paradox for virus assembly identifies a unique antiviral strategy.

8. A chimeric satellite transgene sequence is inefficiently targeted by viroid-induced DNA methylation in tobacco.

9. Limits of variation, specific infectivity, and genome packaging of massively recoded poliovirus genomes.

10. Long-range architecture in a viral RNA genome.