Literature DB >> 11173120

Alternative splicing: increasing diversity in the proteomic world.

B R Graveley1.   

Abstract

How can the genome of Drosophila melanogaster contain fewer genes than the undoubtedly simpler organism Caenorhabditis elegans? The answer must lie within their proteomes. It is becoming clear that alternative splicing has an extremely important role in expanding protein diversity and might therefore partially underlie the apparent discrepancy between gene number and organismal complexity. Alternative splicing can generate more transcripts from a single gene than the number of genes in an entire genome. However, for the vast majority of alternative splicing events, the functional significance is unknown. Developing a full catalog of alternatively spliced transcripts and determining each of their functions will be a major challenge of the upcoming proteomic era.

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Year:  2001        PMID: 11173120     DOI: 10.1016/s0168-9525(00)02176-4

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  451 in total

1.  Non-coding RNAs: the architects of eukaryotic complexity.

Authors:  J S Mattick
Journal:  EMBO Rep       Date:  2001-11       Impact factor: 8.807

2.  The KH-type RNA-binding protein PSI is required for Drosophila viability, male fertility, and cellular mRNA processing.

Authors:  Emmanuel Labourier; Marco Blanchette; Jennie W Feiger; Melissa D Adams; Donald C Rio
Journal:  Genes Dev       Date:  2002-01-01       Impact factor: 11.361

3.  Cloning and characterization of a histone deacetylase, HDAC9.

Authors:  X Zhou; P A Marks; R A Rifkind; V M Richon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-04       Impact factor: 11.205

Review 4.  RNA-protein interactions that regulate pre-mRNA splicing.

Authors:  Ravinder Singh
Journal:  Gene Expr       Date:  2002

Review 5.  Proteomics and a future generation of plant molecular biologists.

Authors:  Justin K M Roberts
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

6.  Complex regulation of the human gene for the Z-DNA binding protein DLM-1.

Authors:  Stefan Rothenburg; Thomas Schwartz; Friedrich Koch-Nolte; Friedrich Haag
Journal:  Nucleic Acids Res       Date:  2002-02-15       Impact factor: 16.971

Review 7.  Genetic dangers in poly(A) signals.

Authors:  N J Proudfoot
Journal:  EMBO Rep       Date:  2001-10       Impact factor: 8.807

8.  SRp30c is a repressor of 3' splice site utilization.

Authors:  Martin J Simard; Benoit Chabot
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

9.  Alternative splicing modulation by a LAMMER kinase impinges on developmental and transcriptome expression.

Authors:  Sigal Savaldi-Goldstein; Dvora Aviv; Olga Davydov; Robert Fluhr
Journal:  Plant Cell       Date:  2003-04       Impact factor: 11.277

10.  A semiautomated approach to gene discovery through expressed sequence tag data mining: discovery of new human transporter genes.

Authors:  Shoshana Brown; Jean L Chang; Wolfgang Sadée; Patricia C Babbitt
Journal:  AAPS PharmSci       Date:  2003
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