Literature DB >> 11167527

Mapping of 14 expressed sequence tags (ESTs) from porcine skeletal muscle by somatic cell hybrid analysis.

R Davoli1, D Bigi, L Fontanesi, P Zambonelli, M Yerle, C Zijlstra, A A Bosma, A Robic, V Russo.   

Abstract

Chromosomal assignments are reported for fourteen porcine expressed sequence tags (ESTs)--CALM1, CRYAB, MYH7, MYL1, PDK4, PGAM2, PYGM, REV3L, RFC1, SLN, SPTBN1, SRM160, TPM1 and YWHAG. The ESTs were derived from our porcine skeletal muscle cDNA library. The ESTs sequences selected for mapping included the presence of the 3'-untranslated region. The assignments were performed using two independent somatic cell hybrid panels providing the possibility of confirmation of the results obtained. The observed localizations are compared with the locations predicted from heterologous (human-pig, pig-human) chromosome painting data and knowledge of the map locations of the human homologues. These results add new information to the porcine genome transcript map.

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Year:  2000        PMID: 11167527     DOI: 10.1046/j.1365-2052.2000.00687.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  3 in total

1.  Characterization of the porcine differentially expressed PDK4 gene and association with meat quality.

Authors:  Jing Lan; Ming-Gang Lei; Yi-Bing Zhang; Jian-Hua Wang; Xiao-Ting Feng; De-Quan Xu; Jian-Fang Gui; Yuan-Zhu Xiong
Journal:  Mol Biol Rep       Date:  2008-12-03       Impact factor: 2.316

2.  The GENETPIG database: a tool for comparative mapping in pig (Sus scrofa).

Authors:  Emmanuelle Karsenty; Emmanuel Barillot; Gwenola Tosser-Klopp; Yvette Lahbib-Mansais; Denis Milan; François Hatey; Susanna Cirera; Milena Sawera; Claus B Jørgensen; Bhanu Chowdhary; Merete Fredholm; Klaus Wimmers; Siriluck Ponsuksili; Roberta Davoli; Luca Fontanesi; Silvia Braglia; Paolo Zambonelli; Daniele Bigi; Stefan Neuenschwander; Joël Gellin
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

3.  Integrative Analysis of Metabolomic, Proteomic and Genomic Data to Reveal Functional Pathways and Candidate Genes for Drip Loss in Pigs.

Authors:  Julia Welzenbach; Christiane Neuhoff; Hanna Heidt; Mehmet Ulas Cinar; Christian Looft; Karl Schellander; Ernst Tholen; Christine Große-Brinkhaus
Journal:  Int J Mol Sci       Date:  2016-08-30       Impact factor: 5.923

  3 in total

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