Literature DB >> 11166645

Genomic analysis of biochemical function.

E J Grayhack1, E M Phizicky.   

Abstract

Establishing the linkage between an individual biochemical activity and the gene(s) specifying that activity has been facilitated by advances in mass spectrometry and affinity purification methods. In addition, a genomic protein array has been produced in yeast by fusing each yeast open reading frame to glutathione-S-transferase, thus linking each protein with its cognate gene. Purification and biochemical assay of pools of glutathione-S-transferase-open-reading-frame proteins allows analysis of the entire proteome for biochemical activities, followed by simple deconvolution to identify the responsible open reading frame. An alternative method to analyze large sets of proteins is the use of protein microarrays in which over 10,000 individual proteins can be immobilized and assayed on a single slide.

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Year:  2001        PMID: 11166645     DOI: 10.1016/s1367-5931(00)00169-1

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  4 in total

1.  The use of Saccharomyces cerevisiae proteomic libraries to identify RNA-modifying proteins.

Authors:  Jane E Jackman; Elizabeth J Grayhack; Eric M Phizicky
Journal:  Methods Mol Biol       Date:  2008

2.  The spindle positioning protein Kar9p interacts with the sumoylation machinery in Saccharomyces cerevisiae.

Authors:  Nida Meednu; Harold Hoops; Sonia D'Silva; Leah Pogorzala; Schuyler Wood; David Farkas; Mark Sorrentino; Elaine Sia; Pam Meluh; Rita K Miller
Journal:  Genetics       Date:  2008-10-01       Impact factor: 4.562

3.  A highly specific phosphatase that acts on ADP-ribose 1''-phosphate, a metabolite of tRNA splicing in Saccharomyces cerevisiae.

Authors:  Neil P Shull; Sherry L Spinelli; Eric M Phizicky
Journal:  Nucleic Acids Res       Date:  2005-01-31       Impact factor: 16.971

4.  Protein arrays: issues to be addressed.

Authors:  M J Taussig
Journal:  Comp Funct Genomics       Date:  2001
  4 in total

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