Literature DB >> 11162732

Crystallization of the F41 fragment of flagellin and data collection from extremely thin crystals.

F A Samatey1, K Imada, F Vonderviszt, Y Shirakihara, K Namba.   

Abstract

Flagellin, which constructs supercoiled filaments of the bacterial flagellum, is very difficult to crystallize because of its strong tendency to polymerize. We therefore crystallized the F41 fragment of flagellin, which does not polymerize because terminal regions that play important roles in polymerization are cleaved off. F41 was crystallized by the hanging drop vapor diffusion method in a mixture of polyethylene glycol, glycerol, and isopropanol, with a reservoir solution covered with silicon oil. The two key factors for success in growing sufficiently large crystals were isopropanol and silicon oil, which worked well to reduce the otherwise very high nucleation rate that resulted in hundreds of tiny crystals. The crystals were grown to very thin plates with thickness less than 10 microm, which made the collection of diffraction data very difficult. Freezing and annealing of the crystals and irradiation at synchrotron beamlines had to be carried out by specific methods and under specific conditions for its structure analysis at 2.0-A resolution. Copyright 2000 Academic Press.

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Year:  2000        PMID: 11162732     DOI: 10.1006/jsbi.2000.4312

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  11 in total

1.  Quantitative comparison of zero-loss and conventional electron diffraction from two-dimensional and thin three-dimensional protein crystals.

Authors:  Koji Yonekura; Saori Maki-Yonekura; Keiichi Namba
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

Review 2.  Effects of flagellin on innate and adaptive immunity.

Authors:  Anna N Honko; Steven B Mizel
Journal:  Immunol Res       Date:  2005       Impact factor: 2.829

3.  Expression, purification, crystallization and preliminary X-ray diffraction analysis of a core fragment of FlgG, a bacterial flagellar rod protein.

Authors:  Yumiko Saijo-Hamano; Hideyuki Matsunami; Keiichi Namba; Katsumi Imada
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-04-30

4.  Glycosylation of b-Type flagellin of Pseudomonas aeruginosa: structural and genetic basis.

Authors:  Amrisha Verma; Michael Schirm; Shiwani K Arora; P Thibault; Susan M Logan; Reuben Ramphal
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

5.  Biochemical Characterization of the Flagellar Rod Components of Rhodobacter sphaeroides: Properties and Interactions.

Authors:  Manuel Osorio-Valeriano; Javier de la Mora; Laura Camarena; Georges Dreyfus
Journal:  J Bacteriol       Date:  2015-11-16       Impact factor: 3.490

6.  Flagellin from Listeria monocytogenes is glycosylated with beta-O-linked N-acetylglucosamine.

Authors:  M Schirm; M Kalmokoff; A Aubry; P Thibault; M Sandoz; S M Logan
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

7.  Flagellin Glycoproteomics of the Periodontitis Associated Pathogen Selenomonas sputigena Reveals Previously Not Described O-glycans and Rhamnose Fragment Rearrangement Occurring on the Glycopeptides.

Authors:  Cornelia B Rath; Falko Schirmeister; Rudolf Figl; Peter H Seeberger; Christina Schäffer; Daniel Kolarich
Journal:  Mol Cell Proteomics       Date:  2018-01-16       Impact factor: 5.911

8.  Flagellin as carrier and adjuvant in cocaine vaccine development.

Authors:  Jonathan W Lockner; Lisa M Eubanks; Jennifer L Choi; Jenny M Lively; Joel E Schlosburg; Karen C Collins; Daniel Globisch; Robin J Rosenfeld-Gunn; Ian A Wilson; Kim D Janda
Journal:  Mol Pharm       Date:  2015-01-07       Impact factor: 4.939

9.  Expression, purification, crystallization and preliminary crystallographic analysis of MxiH, a subunit of the Shigella flexneri type III secretion system needle.

Authors:  Janet E Deane; Frank S Cordes; Pietro Roversi; Steven Johnson; Roma Kenjale; William D Picking; Wendy L Picking; Susan M Lea; Ariel Blocker
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-02-28

Review 10.  Gram-negative flagella glycosylation.

Authors:  Susana Merino; Juan M Tomás
Journal:  Int J Mol Sci       Date:  2014-02-19       Impact factor: 5.923

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