Literature DB >> 11156986

Genetic mapping of quantitative trait loci governing longevity of Caenorhabditis elegans in recombinant-inbred progeny of a Bergerac-BO x RC301 interstrain cross.

S Ayyadevara1, R Ayyadevara, S Hou, J J Thaden, R J Shmookler Reis.   

Abstract

Recombinant-inbred populations, generated from a cross between Caenorhabditis elegans strains Bergerac-BO and RC301, were used to identify quantitative trait loci (QTL) affecting nematode longevity. Genotypes of young controls and longevity-selected worms (the last-surviving 1% from a synchronously aged population) were assessed at dimorphic transposon-specific markers by multiplex polymerase chain reaction. The power of genetic mapping was enhanced, in a novel experimental design, through map expansion by accrual of recombinations over several generations, internally controlled longevity selection from a genetically heterogeneous, homozygous population, and selective genotyping of extremely long-lived worms. Analysis of individual markers indicated seven life-span QTL, situated near markers on chromosomes I (tcbn2), III (stP127), IV (stP13), V (stP6, stP23, and stP128), and X (stP41). These loci were corroborated, and mapped with increased precision, by nonparametric interval mapping-which supported all loci implicated by single-marker analysis. In addition, a life-span QTL on chromosome II (stP100-stP196), was significant only by interval mapping. Congenic lines were constructed for the longevity QTL on chromosomes III and X, by backcrossing the Bergerac-BO QTL allele into an RC301 background with selection for flanking markers. Survival data for these lines demonstrated consistent and significant effects of each QTL on life span.

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Year:  2001        PMID: 11156986      PMCID: PMC1461506     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  41 in total

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Authors:  K D Kimura; H A Tissenbaum; Y Liu; G Ruvkun
Journal:  Science       Date:  1997-08-15       Impact factor: 47.728

2.  Determination of life-span in Caenorhabditis elegans by four clock genes.

Authors:  B Lakowski; S Hekimi
Journal:  Science       Date:  1996-05-17       Impact factor: 47.728

3.  Mapping quantitative trait loci affecting life history traits in the nematode Caenorhabditis elegans.

Authors:  D R Shook; A Brooks; T E Johnson
Journal:  Genetics       Date:  1996-03       Impact factor: 4.562

4.  Mapping quantitative trait loci for complex binary diseases using line crosses.

Authors:  S Xu; W R Atchley
Journal:  Genetics       Date:  1996-07       Impact factor: 4.562

5.  Defining genes that govern longevity in Caenorhabditis elegans.

Authors:  R H Ebert; M A Shammas; B H Sohal; R S Sohal; N K Egilmez; S Ruggles; R J Shmookler Reis
Journal:  Dev Genet       Date:  1996

6.  Strain evolution in Caenorhabditis elegans: transposable elements as markers of interstrain evolutionary history.

Authors:  N K Egilmez; R H Ebert; R J Shmookler Reis
Journal:  J Mol Evol       Date:  1995-04       Impact factor: 2.395

7.  Chromosomal regions associated with segregation distortion of molecular markers in F2, backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L.).

Authors:  Y Xu; L Zhu; J Xiao; N Huang; S R McCouch
Journal:  Mol Gen Genet       Date:  1997-02-20

8.  A phosphatidylinositol-3-OH kinase family member regulating longevity and diapause in Caenorhabditis elegans.

Authors:  J Z Morris; H A Tissenbaum; G Ruvkun
Journal:  Nature       Date:  1996-08-08       Impact factor: 49.962

9.  Structural and functional conservation of the Caenorhabditis elegans timing gene clk-1.

Authors:  J J Ewbank; T M Barnes; B Lakowski; M Lussier; H Bussey; S Hekimi
Journal:  Science       Date:  1997-02-14       Impact factor: 47.728

10.  Quantitative trait loci controlling halothane sensitivity in Caenorhabditis elegans.

Authors:  B van Swinderen; D R Shook; R H Ebert; V A Cherkasova; T E Johnson; R J Shmookler Reis; C M Crowder
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

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  19 in total

1.  Genetic loci modulating fitness and life span in Caenorhabditis elegans: categorical trait interval mapping in CL2a x Bergerac-BO recombinant-inbred worms.

Authors:  Srinivas Ayyadevara; Rajani Ayyadevara; Anthony Vertino; Andrzej Galecki; John J Thaden; Robert J Shmookler Reis
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

Review 2.  Animal models for discovery and assessment of genetic determinants of osteoporosis.

Authors:  Robert J Shmookler Reis; Robert H Ebert
Journal:  Osteoporos Int       Date:  2003-08-29       Impact factor: 4.507

3.  Quantitative trait loci affecting starvation resistance in Drosophila melanogaster.

Authors:  Susan T Harbison; Akihiko H Yamamoto; Juan J Fanara; Koenraad K Norga; Trudy F C Mackay
Journal:  Genetics       Date:  2004-04       Impact factor: 4.562

4.  New experiments for an undivided genetics.

Authors:  Michael R Rose; Laurence D Mueller; Molly K Burke
Journal:  Genetics       Date:  2011-05       Impact factor: 4.562

Review 5.  The Convergence of Systems and Reductionist Approaches in Complex Trait Analysis.

Authors:  Evan G Williams; Johan Auwerx
Journal:  Cell       Date:  2015-07-02       Impact factor: 41.582

6.  Caenorhabditis elegans PI3K mutants reveal novel genes underlying exceptional stress resistance and lifespan.

Authors:  Srinivas Ayyadevara; Cagdaş Tazearslan; Puneet Bharill; Ramani Alla; Eric Siegel; Robert J Shmookler Reis
Journal:  Aging Cell       Date:  2009-09-17       Impact factor: 9.304

Review 7.  Integrating evolutionary and molecular genetics of aging.

Authors:  Thomas Flatt; Paul S Schmidt
Journal:  Biochim Biophys Acta       Date:  2009-07-18

8.  Genomic response to selection for postponed senescence in Drosophila.

Authors:  Rhonda H Wilson; Chao Qiang Lai; Richard F Lyman; Trudy F C Mackay
Journal:  Mech Ageing Dev       Date:  2012-12-21       Impact factor: 5.432

9.  A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans.

Authors:  Agnieszka Doroszuk; L Basten Snoek; Emilie Fradin; Joost Riksen; Jan Kammenga
Journal:  Nucleic Acids Res       Date:  2009-06-19       Impact factor: 16.971

Review 10.  From QTL to gene: C. elegans facilitates discoveries of the genetic mechanisms underlying natural variation.

Authors:  Kathryn S Evans; Marijke H van Wijk; Patrick T McGrath; Erik C Andersen; Mark G Sterken
Journal:  Trends Genet       Date:  2021-07-03       Impact factor: 11.639

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