Literature DB >> 11154274

Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI.

C R Clapier1, G Längst, D F Corona, P B Becker, K P Nightingale.   

Abstract

The ATPase ISWI can be considered the catalytic core of several multiprotein nucleosome remodeling machines. Alone or in the context of nucleosome remodeling factor, the chromatin accessibility complex (CHRAC), or ACF, ISWI catalyzes a number of ATP-dependent transitions of chromatin structure that are currently best explained by its ability to induce nucleosome sliding. In addition, ISWI can function as a nucleosome spacing factor during chromatin assembly, where it will trigger the ordering of newly assembled nucleosomes into regular arrays. Both nucleosome remodeling and nucleosome spacing reactions are mechanistically unexplained. As a step toward defining the interaction of ISWI with its substrate during nucleosome remodeling and chromatin assembly we generated a set of nucleosomes lacking individual histone N termini from recombinant histones. We found the conserved N termini (the N-terminal tails) of histone H4 essential to stimulate ISWI ATPase activity, in contrast to other histone tails. Remarkably, the H4 N terminus, but none of the other tails, was critical for CHRAC-induced nucleosome sliding and for the generation of regularity in nucleosomal arrays by ISWI. Direct nucleosome binding studies did not reflect a dependence on the H4 tail for ISWI-nucleosome interactions. We conclude that the H4 tail is critically required for nucleosome remodeling and spacing at a step subsequent to interaction with the substrate.

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Year:  2001        PMID: 11154274      PMCID: PMC86678          DOI: 10.1128/MCB.21.3.875-883.2001

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  55 in total

1.  Preparation of nucleosome core particle from recombinant histones.

Authors:  K Luger; T J Rechsteiner; T J Richmond
Journal:  Methods Enzymol       Date:  1999       Impact factor: 1.600

2.  ISWI is an ATP-dependent nucleosome remodeling factor.

Authors:  D F Corona; G Längst; C R Clapier; E J Bonte; S Ferrari; J W Tamkun; P B Becker
Journal:  Mol Cell       Date:  1999-02       Impact factor: 17.970

3.  The bromodomain of Gcn5p interacts in vitro with specific residues in the N terminus of histone H4.

Authors:  P Ornaghi; P Ballario; A M Lena; A González; P Filetici
Journal:  J Mol Biol       Date:  1999-03-19       Impact factor: 5.469

4.  Stable remodeling of tailless nucleosomes by the human SWI-SNF complex.

Authors:  J R Guyon; G J Narlikar; S Sif; R E Kingston
Journal:  Mol Cell Biol       Date:  1999-03       Impact factor: 4.272

5.  Requirement of RSF and FACT for transcription of chromatin templates in vitro.

Authors:  G LeRoy; G Orphanides; W S Lane; D Reinberg
Journal:  Science       Date:  1998-12-04       Impact factor: 47.728

Review 6.  Structure and function of the core histone N-termini: more than meets the eye.

Authors:  J C Hansen; C Tse; A P Wolffe
Journal:  Biochemistry       Date:  1998-12-22       Impact factor: 3.162

7.  Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae.

Authors:  T Tsukiyama; J Palmer; C C Landel; J Shiloach; C Wu
Journal:  Genes Dev       Date:  1999-03-15       Impact factor: 11.361

8.  ACF consists of two subunits, Acf1 and ISWI, that function cooperatively in the ATP-dependent catalysis of chromatin assembly.

Authors:  T Ito; M E Levenstein; D V Fyodorov; A K Kutach; R Kobayashi; J T Kadonaga
Journal:  Genes Dev       Date:  1999-06-15       Impact factor: 11.361

9.  Structure and ligand of a histone acetyltransferase bromodomain.

Authors:  C Dhalluin; J E Carlson; L Zeng; C He; A K Aggarwal; M M Zhou
Journal:  Nature       Date:  1999-06-03       Impact factor: 49.962

10.  Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits.

Authors:  M L Phelan; S Sif; G J Narlikar; R E Kingston
Journal:  Mol Cell       Date:  1999-02       Impact factor: 17.970

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  109 in total

1.  The histone H4 acetyltransferase MOF uses a C2HC zinc finger for substrate recognition.

Authors:  A Akhtar; P B Becker
Journal:  EMBO Rep       Date:  2001-02       Impact factor: 8.807

2.  A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI.

Authors:  Cedric R Clapier; Karl P Nightingale; Peter B Becker
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

3.  Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling.

Authors:  A Eberharter; S Ferrari; G Längst; T Straub; A Imhof; P Varga-Weisz; M Wilm; P B Becker
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

4.  Reconstitution of recombinant chromatin establishes a requirement for histone-tail modifications during chromatin assembly and transcription.

Authors:  A Loyola; G LeRoy; Y H Wang; D Reinberg
Journal:  Genes Dev       Date:  2001-11-01       Impact factor: 11.361

5.  Evidence for DNA translocation by the ISWI chromatin-remodeling enzyme.

Authors:  Iestyn Whitehouse; Chris Stockdale; Andrew Flaus; Mark D Szczelkun; Tom Owen-Hughes
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

6.  Recruitment of the nucleolar remodeling complex NoRC establishes ribosomal DNA silencing in chromatin.

Authors:  Ralf Strohner; Attila Németh; Karl P Nightingale; Ingrid Grummt; Peter B Becker; Gernot Längst
Journal:  Mol Cell Biol       Date:  2004-02       Impact factor: 4.272

7.  Global and specific transcriptional repression by the histone H3 amino terminus in yeast.

Authors:  Nevin Sabet; Fumin Tong; James P Madigan; Sam Volo; M Mitchell Smith; Randall H Morse
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-20       Impact factor: 11.205

8.  Topography of the ISW2-nucleosome complex: insights into nucleosome spacing and chromatin remodeling.

Authors:  Mohamedi N Kagalwala; Benjamin J Glaus; Weiwei Dang; Martin Zofall; Blaine Bartholomew
Journal:  EMBO J       Date:  2004-05-06       Impact factor: 11.598

9.  The chromatin remodeling complex NoRC and TTF-I cooperate in the regulation of the mammalian rRNA genes in vivo.

Authors:  Attila Németh; Ralf Strohner; Ingrid Grummt; Gernot Längst
Journal:  Nucleic Acids Res       Date:  2004-08-03       Impact factor: 16.971

Review 10.  Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes.

Authors:  Cedric R Clapier; Janet Iwasa; Bradley R Cairns; Craig L Peterson
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-17       Impact factor: 94.444

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