Literature DB >> 11146650

Visualization of gene activity in living cells.

T Tsukamoto1, N Hashiguchi, S M Janicki, T Tumbar, A S Belmont, D L Spector.   

Abstract

Chromatin structure is thought to play a critical role in gene expression. Using the lac operator/repressor system and two colour variants of green fluorescent protein (GFP), we developed a system to visualize a gene and its protein product directly in living cells, allowing us to examine the spatial organization and timing of gene expression in vivo. Dynamic morphological changes in chromatin structure, from a condensed to an open structure, were observed upon gene activation, and targeting of the gene product, cyan fluorescent protein (CFP) reporter to peroxisomes was visualized directly in living cells. We found that the integrated gene locus was surrounded by a promyelocytic leukaemia (PML) nuclear body. The association was transcription independent but was dependent upon the direct in vivo binding of specific proteins (EYFP/lac repressor, tetracycline receptor/VP16 transactivator) to the locus. The ability to visualize gene expression directly in living cells provides a powerful system with which to study the dynamics of nuclear events such as transcription, RNA processing and DNA repair.

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Year:  2000        PMID: 11146650     DOI: 10.1038/35046510

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  122 in total

1.  Linear 2' O-Methyl RNA probes for the visualization of RNA in living cells.

Authors:  C Molenaar; S A Marras; J C Slats; J C Truffert; M Lemaître; A K Raap; R W Dirks; H J Tanke
Journal:  Nucleic Acids Res       Date:  2001-09-01       Impact factor: 16.971

Review 2.  Functional architecture in the cell nucleus.

Authors:  M Dundr; T Misteli
Journal:  Biochem J       Date:  2001-06-01       Impact factor: 3.857

3.  The connection between chromatin motion on the 100 nm length scale and core histone dynamics in live XTC-2 cells and isolated nuclei.

Authors:  Sara K Davis; Christopher J Bardeen
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

Review 4.  Micromechanical studies of mitotic chromosomes.

Authors:  M G Poirier; J F Marko
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

5.  Aberrant lamination in the cerebral cortex of mouse embryos lacking DNA topoisomerase IIbeta.

Authors:  Yi Lisa Lyu; James C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-28       Impact factor: 11.205

6.  Dynamics of single mRNPs in nuclei of living cells.

Authors:  Yaron Shav-Tal; Xavier Darzacq; Shailesh M Shenoy; Dahlene Fusco; Susan M Janicki; David L Spector; Robert H Singer
Journal:  Science       Date:  2004-06-18       Impact factor: 47.728

7.  Upstream binding factor association induces large-scale chromatin decondensation.

Authors:  Danyang Chen; Andrew S Belmont; Sui Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-11       Impact factor: 11.205

Review 8.  Imaging gene expression in single living cells.

Authors:  Yaron Shav-Tal; Robert H Singer; Xavier Darzacq
Journal:  Nat Rev Mol Cell Biol       Date:  2004-10       Impact factor: 94.444

9.  Visualization of parental HSV-1 genomes and replication compartments in association with ND10 in live infected cells.

Authors:  George Sourvinos; Roger D Everett
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

10.  Generic features of tertiary chromatin structure as detected in natural chromosomes.

Authors:  Waltraud G Müller; Dietmar Rieder; Gregor Kreth; Christoph Cremer; Zlatko Trajanoski; James G McNally
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

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