Literature DB >> 11139042

Nonlinear thermodynamic models of voltage-dependent currents.

A Destexhe1, J R Huguenard.   

Abstract

Hodgkin and Huxley provided the first quantitative description of voltage-dependent currents and adjusted their model to experimental data using empirical functions of voltage. A physically plausible formalism was proposed later by assuming that transition rates depend exponentially on a free-energy barrier, by analogy with the theory of reaction rates. It was also assumed that the free energy depends linearly on voltage. This thermodynamic formalism can accurately describe many processes, but the resulting time constants can be arbitrarily fast, which may also lead to aberrant behavior. We considered here a physically plausible solution to this problem by including nonlinear effects of the electrical field on the free energy. We show that including effects such as mechanical constraints, inherent to the structure of the ion channel protein, leads to more accurate thermodynamic models. These models can account for voltage-dependent transitions that are rate-limited in a given voltage range, without invoking additional states. We illustrate their applicability to fit experimental data by considering the case of the T-type calcium current in thalamic neurons.

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Year:  2000        PMID: 11139042     DOI: 10.1023/a:1026535704537

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  20 in total

1.  Simulation of the currents involved in rhythmic oscillations in thalamic relay neurons.

Authors:  J R Huguenard; D A McCormick
Journal:  J Neurophysiol       Date:  1992-10       Impact factor: 2.714

Review 2.  Gating of sodium and potassium channels.

Authors:  F Bezanilla
Journal:  J Membr Biol       Date:  1985       Impact factor: 1.843

3.  A transition state theory approach to the kinetics of conductance changes in excitable membranes.

Authors:  R W Tsien; D Noble
Journal:  J Membr Biol       Date:  1969-12       Impact factor: 1.843

Review 4.  Voltage gating of ion channels.

Authors:  F J Sigworth
Journal:  Q Rev Biophys       Date:  1994-02       Impact factor: 5.318

Review 5.  Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism.

Authors:  A Destexhe; Z F Mainen; T J Sejnowski
Journal:  J Comput Neurosci       Date:  1994-08       Impact factor: 1.621

Review 6.  Low-threshold calcium currents in central nervous system neurons.

Authors:  J R Huguenard
Journal:  Annu Rev Physiol       Date:  1996       Impact factor: 19.318

Review 7.  Sodium channels and gating currents.

Authors:  C M Armstrong
Journal:  Physiol Rev       Date:  1981-07       Impact factor: 37.312

8.  A reinterpretation of mammalian sodium channel gating based on single channel recording.

Authors:  R W Aldrich; D P Corey; C F Stevens
Journal:  Nature       Date:  1983 Dec 1-7       Impact factor: 49.962

9.  A novel T-type current underlies prolonged Ca(2+)-dependent burst firing in GABAergic neurons of rat thalamic reticular nucleus.

Authors:  J R Huguenard; D A Prince
Journal:  J Neurosci       Date:  1992-10       Impact factor: 6.167

Review 10.  Molecular determinants of channel function.

Authors:  O S Andersen; R E Koeppe
Journal:  Physiol Rev       Date:  1992-10       Impact factor: 37.312

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  16 in total

1.  Availability of low-threshold Ca2+ current in retinal ganglion cells.

Authors:  Sherwin C Lee; Yuki Hayashida; Andrew T Ishida
Journal:  J Neurophysiol       Date:  2003-12       Impact factor: 2.714

2.  Quantification of gastrointestinal sodium channelopathy.

Authors:  Yong Cheng Poh; Arthur Beyder; Peter R Strege; Gianrico Farrugia; Martin L Buist
Journal:  J Theor Biol       Date:  2011-09-21       Impact factor: 2.691

3.  Toxin detection based on action potential shape analysis using a realistic mathematical model of differentiated NG108-15 cells.

Authors:  Dinesh K Mohan; Peter Molnar; James J Hickman
Journal:  Biosens Bioelectron       Date:  2006-02-03       Impact factor: 10.618

4.  Models of utricular bouton afferents: role of afferent-hair cell connectivity in determining spike train regularity.

Authors:  William R Holmes; Janice A Huwe; Barbara Williams; Michael H Rowe; Ellengene H Peterson
Journal:  J Neurophysiol       Date:  2017-02-15       Impact factor: 2.714

5.  Four-State Model for Simulating Kinetic and Steady-State Voltage-Dependent Gating of Gap Junctions.

Authors:  Mindaugas Snipas; Tadas Kraujalis; Kestutis Maciunas; Lina Kraujaliene; Lukas Gudaitis; Vytas K Verselis
Journal:  Biophys J       Date:  2020-09-02       Impact factor: 4.033

6.  Neuromorphic silicon neuron circuits.

Authors:  Giacomo Indiveri; Bernabé Linares-Barranco; Tara Julia Hamilton; André van Schaik; Ralph Etienne-Cummings; Tobi Delbruck; Shih-Chii Liu; Piotr Dudek; Philipp Häfliger; Sylvie Renaud; Johannes Schemmel; Gert Cauwenberghs; John Arthur; Kai Hynna; Fopefolu Folowosele; Sylvain Saighi; Teresa Serrano-Gotarredona; Jayawan Wijekoon; Yingxue Wang; Kwabena Boahen
Journal:  Front Neurosci       Date:  2011-05-31       Impact factor: 4.677

7.  Training deep neural density estimators to identify mechanistic models of neural dynamics.

Authors:  Pedro J Gonçalves; Jan-Matthis Lueckmann; Michael Deistler; Marcel Nonnenmacher; Kaan Öcal; Giacomo Bassetto; Chaitanya Chintaluri; William F Podlaski; Sara A Haddad; Tim P Vogels; David S Greenberg; Jakob H Macke
Journal:  Elife       Date:  2020-09-17       Impact factor: 8.140

8.  A Microscopic Capacitor Model of Voltage Coupling in Membrane Proteins: Gating Charge Fluctuations in Ci-VSD.

Authors:  Ilsoo Kim; Arieh Warshel
Journal:  J Phys Chem B       Date:  2016-01-14       Impact factor: 2.991

9.  Heat pulse excitability of vestibular hair cells and afferent neurons.

Authors:  Richard D Rabbitt; Alan M Brichta; Hessam Tabatabaee; Peter J Boutros; JoongHo Ahn; Charles C Della Santina; Lauren A Poppi; Rebecca Lim
Journal:  J Neurophysiol       Date:  2016-05-25       Impact factor: 2.714

10.  Analysis of toxin-induced changes in action potential shape for drug development.

Authors:  Nesar Akanda; Peter Molnar; Maria Stancescu; James J Hickman
Journal:  J Biomol Screen       Date:  2009-12
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