Literature DB >> 11139040

Parameter estimation methods for single neuron models.

J Tabak1, C R Murphey, L E Moore.   

Abstract

With the advancement in computer technology, it has become possible to fit complex models to neuronal data. In this work, we test how two methods can estimate parameters of simple neuron models (passive soma) to more complex ones (neuron with one dendritic cylinder and two active conductances). The first method uses classical voltage traces resulting from current pulses injection (time domain), while the second uses measures of the neuron's response to sinusoidal stimuli (frequency domain). Both methods estimate correctly the parameters in all cases studied. However, the time-domain method is slower and more prone to estimation errors in the cable parameters than the frequency-domain method. Because with noisy data the goodness of fit does not distinguish between different solutions, we suggest that running the estimation procedure a large number of times might help find a good solution and can provide information about the interactions between parameters. Also, because the formulation used for the model's response in the frequency domain is analytical, one can derive a local sensitivity analysis for each parameter. This analysis indicates how well a parameter is likely to be estimated and helps choose an optimal stimulation protocol. Finally, the tests suggest a strategy for fitting single-cell models using the two methods examined.

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Year:  2000        PMID: 11139040     DOI: 10.1023/a:1026531603628

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  20 in total

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Authors:  L E Moore; B N Christensen
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Authors:  M Kawato
Journal:  J Theor Biol       Date:  1984-11-07       Impact factor: 2.691

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Authors:  D Durand
Journal:  Biophys J       Date:  1984-11       Impact factor: 4.033

9.  Recovery of cable properties through active and passive modeling of subthreshold membrane responses from laterodorsal tegmental neurons.

Authors:  A Surkis; C S Peskin; D Tranchina; C S Leonard
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10.  Voltage-clamp frequency domain analysis of NMDA-activated neurons.

Authors:  L E Moore; R H Hill; S Grillner
Journal:  J Exp Biol       Date:  1993-02       Impact factor: 3.312

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  6 in total

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  6 in total

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