Literature DB >> 11126766

NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole (Clethrionomys glareolus), wood mouse (Apodemus sylvaticus), white toothed shrew (Crocidura suaveolens) and the laboratory rat.

J L Griffin1, L A Walker, S Garrod, E Holmes, R F Shore, J K Nicholson.   

Abstract

The metabolic profiles of three wild mammals that vary in their trophic strategies, the herbivorous bank vole (Clethrionomys glareolus), the granivorous wood mouse (Apodemus sylvaticus), and the insectivorous white-toothed shrew (Crocidura suaveolens), were compared with that of a widely used strain of laboratory rat (Sprague Dawley). In conjunction with NMR spectroscopic investigations into the urine and blood plasma composition for these mammals, high resolution magic angle spinning (HRMAS) 1H-nuclear magnetic resonance (NMR) spectroscopy was applied to investigate the composition of intact kidney samples. Adaptation to natural diet affects both renal metabolism and urinary profiles, and while these techniques have been used to study the metabolism of the laboratory rat little is known about wild small mammals. The species were readily separated by their urinary profiles using either crude metabolite ratios or statistical pattern recognition. Bank vole urine contained higher concentrations of aromatic amino acids compared with the other small mammals, while the laboratory rats produced relatively more hippurate. HRMAS 1H-NMR demonstrated striking differences in both lipid concentration and composition between the wild mammals and Sprague Dawley rats. Bank voles contained high concentrations of the aromatic amino acids phenylalanine, tyrosine and tryptophan in all tissue and biofluids studied. This study demonstrates the analytical power of combined NMR techniques for the study of inter-species metabolism and further demonstrates that metabolic data acquired on laboratory animals cannot be extended to wild species.

Entities:  

Mesh:

Year:  2000        PMID: 11126766     DOI: 10.1016/s0305-0491(00)00276-5

Source DB:  PubMed          Journal:  Comp Biochem Physiol B Biochem Mol Biol        ISSN: 1096-4959            Impact factor:   2.231


  9 in total

Review 1.  Metabolic profiles to define the genome: can we hear the phenotypes?

Authors:  Julian L Griffin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-06-29       Impact factor: 6.237

Review 2.  Metabolomics, pathway regulation, and pathway discovery.

Authors:  Guo-Fang Zhang; Sushabhan Sadhukhan; Gregory P Tochtrop; Henri Brunengraber
Journal:  J Biol Chem       Date:  2011-05-12       Impact factor: 5.157

3.  Environmental metabonomics: applying combination biomarker analysis in earthworms at a metal contaminated site.

Authors:  Jacob G Bundy; David J Spurgeon; Claus Svendsen; Peter K Hankard; Jason M Weeks; Daniel Osborn; John C Lindon; Jeremy K Nicholson
Journal:  Ecotoxicology       Date:  2004-11       Impact factor: 2.823

4.  Application of ex vivo (1)H NMR metabonomics to the characterization and possible detection of renal cell carcinoma metastases.

Authors:  Hongchang Gao; Baijun Dong; Jianmin Jia; Huan Zhu; Chengfeng Diao; Zhihan Yan; Yiran Huang; Xiaokun Li
Journal:  J Cancer Res Clin Oncol       Date:  2012-01-19       Impact factor: 4.553

5.  1H NMR metabolomics study of age profiling in children.

Authors:  Haiwei Gu; Zhengzheng Pan; Bowei Xi; Bryan E Hainline; Narasimhamurthy Shanaiah; Vincent Asiago; G A Nagana Gowda; Daniel Raftery
Journal:  NMR Biomed       Date:  2009-10       Impact factor: 4.044

6.  Metabolomic and genetic analysis of biomarkers for peroxisome proliferator-activated receptor alpha expression and activation.

Authors:  Yueying Zhen; Kristopher W Krausz; Chi Chen; Jeffrey R Idle; Frank J Gonzalez
Journal:  Mol Endocrinol       Date:  2007-06-05

7.  NMR-based metabolic characterization of chicken tissues and biofluids: a model for avian research.

Authors:  Caroline Ivanne Le Roy; Luke John Mappley; Roberto Marcello La Ragione; Martin John Woodward; Sandrine Paule Claus
Journal:  Metabolomics       Date:  2016-09-15       Impact factor: 4.290

Review 8.  A review of the pharmaceutical exposome in aquatic fauna.

Authors:  Thomas H Miller; Nicolas R Bury; Stewart F Owen; James I MacRae; Leon P Barron
Journal:  Environ Pollut       Date:  2018-04-10       Impact factor: 8.071

9.  Metabonomics Combined with UPLC-MS Chemical Profile for Discovery of Antidepressant Ingredients of a Traditional Chinese Medicines Formula, Chaihu-Shu-Gan-San.

Authors:  Hongmei Jia; Zhiheng Su; Wei Long; Yuetao Liu; Xing Chang; Hongwu Zhang; Gang Ding; Yufei Feng; Dayong Cai; Zhongmei Zou
Journal:  Evid Based Complement Alternat Med       Date:  2013-04-04       Impact factor: 2.629

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.