Literature DB >> 11121491

Quantitative analysis of globin gene induction in single human erythroleukemic cells.

R D Smith1, J D Malley, A N Schechter.   

Abstract

The mechanisms involved in the normal developmental regulation of globin gene expression, and the response to pharmacological agents that elevate fetal hemoglobin, may be expected to involve either changes in each cell or a selection process affecting subsets of differentiating erythroid cells. To study these mechanisms we have developed assays to measure mRNA levels in single erythroid cells. The assay involved the use of globin-specific probes, with no detectable cross-reactivity, in real-time, fluorescence-based quantitative PCR (Q-PCR). We had previously used this Q-PCR method to measure globin mRNA levels in cultures of primary erythroid cells demonstrating that drugs like hydroxyurea, 5-azacytidine and butyric acid each yielded increases in gamma/( gamma + ss) mRNA ratios, with differential effects on ss-globin levels. We have now extended this approach to measure globin mRNA levels in single K562 cells, a human erythroleukemic cell line, with and without 30 microM hemin treatment. Hemin exposure increases total hemoglobin levels by approximately 9-fold and total alpha-, epsilon- and gamma-globin mRNA levels by 1.5-2.3-fold. Single cell analyses showed initial wide distributions of each of the three individual globin mRNA levels with most cells having detectable but very low levels of each globin transcript. Hemin induction shifted the distributions to higher levels, with a tendency to residual left skewing as some cells remained with very low expression levels despite the effect of hemin in increasing expression in most of these low expressing cells. Thus transcriptional heterogeneity remains a crucial variable, even in this extensively used model of human erythroid biology, and clearly influences strongly the response to inducing agents. These methods may enable us to define better possible molecular and/or cellular models of globin gene modulation.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 11121491      PMCID: PMC115244          DOI: 10.1093/nar/28.24.4998

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

1.  Analysis of gene expression in single live neurons.

Authors:  J Eberwine; H Yeh; K Miyashiro; Y Cao; S Nair; R Finnell; M Zettel; P Coleman
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-01       Impact factor: 11.205

2.  Spontaneous delta- to beta-globin switching in K562 human leukemia cells.

Authors:  B Mookerjee; M O Arcasoy; G F Atweh
Journal:  Blood       Date:  1992-02-01       Impact factor: 22.113

3.  Construction of cDNA libraries from single cells.

Authors:  G Brady; N N Iscove
Journal:  Methods Enzymol       Date:  1993       Impact factor: 1.600

4.  Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences.

Authors:  J Banerji; S Rusconi; W Schaffner
Journal:  Cell       Date:  1981-12       Impact factor: 41.582

5.  Hemoglobin expression in clones of K562 cell line.

Authors:  U Testa; W Vainchenker; Y Beuzard; P Rouyer-Fessard; A Guerrasio; M Titeux; P Lapotre; J Bouguet; J Breton-Gorius; J Rosa
Journal:  Eur J Biochem       Date:  1982-01

6.  Embryonic-fetal erythroid characteristics of a human leukemic cell line.

Authors:  E J Benz; M J Murnane; B L Tonkonow; B W Berman; E M Mazur; C Cavallesco; T Jenko; E L Snyder; B G Forget; R Hoffman
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

7.  Simian virus 40 enhancer increases number of RNA polymerase II molecules on linked DNA.

Authors:  R Treisman; T Maniatis
Journal:  Nature       Date:  1985 May 2-8       Impact factor: 49.962

8.  Synthesis and turnover of globin mRNA in murine erythroleukemia cells induced with hemin.

Authors:  K Lowenhaupt; J B Lingrel
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

9.  Inducible transcription of five globin genes in K562 human leukemia cells.

Authors:  A Dean; T J Ley; R K Humphries; M Fordis; A N Schechter
Journal:  Proc Natl Acad Sci U S A       Date:  1983-09       Impact factor: 11.205

10.  Definition of the minimal requirements within the human beta-globin gene and the dominant control region for high level expression.

Authors:  P Collis; M Antoniou; F Grosveld
Journal:  EMBO J       Date:  1990-01       Impact factor: 11.598

View more
  12 in total

1.  Silencing of Agamma-globin gene expression during adult definitive erythropoiesis mediated by GATA-1-FOG-1-Mi2 complex binding at the -566 GATA site.

Authors:  Susanna Harju-Baker; Flávia C Costa; Halyna Fedosyuk; Renee Neades; Kenneth R Peterson
Journal:  Mol Cell Biol       Date:  2008-03-17       Impact factor: 4.272

2.  A phase I, pharmacokinetic, and pharmacodynamic evaluation of the DNA methyltransferase inhibitor 5-fluoro-2'-deoxycytidine, administered with tetrahydrouridine.

Authors:  Edward M Newman; Robert J Morgan; Shivaani Kummar; Jan H Beumer; M Suzette Blanchard; Christopher Ruel; Anthony B El-Khoueiry; Mary I Carroll; Jessie M Hou; Chun Li; Heinz J Lenz; Julie L Eiseman; James H Doroshow
Journal:  Cancer Chemother Pharmacol       Date:  2015-01-08       Impact factor: 3.333

3.  Mechanism for fetal hemoglobin induction by histone deacetylase inhibitors involves gamma-globin activation by CREB1 and ATF-2.

Authors:  Jose Sangerman; Moo Seung Lee; Xiao Yao; Eugene Oteng; Cheng-Hui Hsiao; Wei Li; Sima Zein; Solomon F Ofori-Acquah; Betty S Pace
Journal:  Blood       Date:  2006-08-08       Impact factor: 22.113

4.  Effects of hemin and thermal stress exposure on JWA expression.

Authors:  Ming Zhao; Rui Chen; Aiping Li; Jianwei Zhou
Journal:  Front Med China       Date:  2007-02

5.  Inflammasome Regulates Hematopoiesis through Cleavage of the Master Erythroid Transcription Factor GATA1.

Authors:  Sylwia D Tyrkalska; Ana B Pérez-Oliva; Lola Rodríguez-Ruiz; Francisco J Martínez-Morcillo; Francisca Alcaraz-Pérez; Francisco J Martínez-Navarro; Christophe Lachaud; Nouraiz Ahmed; Timm Schroeder; Irene Pardo-Sánchez; Sergio Candel; Azucena López-Muñoz; Avik Choudhuri; Marlies P Rossmann; Leonard I Zon; María L Cayuela; Diana García-Moreno; Victoriano Mulero
Journal:  Immunity       Date:  2019-06-04       Impact factor: 31.745

6.  Deficiencies in the DNA Binding Protein ARID3a Alter Chromatin Structures Important for Early Human Erythropoiesis.

Authors:  Joshua Garton; Malini Shankar; Brittany Chapman; Kira Rose; Patrick M Gaffney; Carol F Webb
Journal:  Immunohorizons       Date:  2021-10-18

7.  The Ethanol Extract of Fructus trichosanthis Promotes Fetal Hemoglobin Production via p38 MAPK Activation and ERK Inactivation in K562 Cells.

Authors:  Hui Li; Chun Hay Ko; Suk Ying Tsang; Ping Chung Leung; Ming Chui Fung; Kwok Pui Fung
Journal:  Evid Based Complement Alternat Med       Date:  2011-08-11       Impact factor: 2.629

8.  Epsilon haemoglobin specific antibodies with applications in noninvasive prenatal diagnosis.

Authors:  Morten Draeby Sørensen; Regina Gonzalez Dosal; Kim Bak Jensen; Britta Christensen; Steen Kølvraa; Uffe Birk Jensen; Peter Kristensen
Journal:  J Biomed Biotechnol       Date:  2009-07-14

9.  Inter-MAR association contributes to transcriptionally active looping events in human beta-globin gene cluster.

Authors:  Li Wang; Li-Jun Di; Xiang Lv; Wei Zheng; Zheng Xue; Zhi-Chen Guo; De-Pei Liu; Chi-Chuan Liang
Journal:  PLoS One       Date:  2009-02-27       Impact factor: 3.240

10.  Digital encoding of cellular mRNAs enabling precise and absolute gene expression measurement by single-molecule counting.

Authors:  Glenn K Fu; Julie Wilhelmy; David Stern; H Christina Fan; Stephen P A Fodor
Journal:  Anal Chem       Date:  2014-03-04       Impact factor: 6.986

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.