Literature DB >> 11119307

Morphants: a new systematic vertebrate functional genomics approach.

S C Ekker1.   

Abstract

The vertebrate genome contains a predicted 50 000-100 000 genes, many of unknown function. The recent development of morpholino-based gene knock-down technology in zebrafish has opened the door to the genome-wide assignment of function based on sequence in a model vertebrate. This review describes technical aspects of morpholino use for functional genomics applications, including the potential for multigene targeting and known methodological limitations. The result of successful gene inactivation by this agent is proposed to yield embryos with a 'morphant' phenotypic designation. The establishment of a morphant database opens the door to true functional genomics using the vertebrate, Danio rerio. Copyright 2000 John Wiley & Sons, Ltd.

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Year:  2000        PMID: 11119307      PMCID: PMC2448384          DOI: 10.1002/1097-0061(200012)17:4<302::AID-YEA53>3.0.CO;2-#

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  2 in total

1.  Jumping the gun on mouse gene expression.

Authors:  M Zernicka-Goetz
Journal:  Nature       Date:  2000-06-15       Impact factor: 49.962

Review 2.  Morphants: a new systematic vertebrate functional genomics approach.

Authors:  S C Ekker
Journal:  Yeast       Date:  2000-12       Impact factor: 3.239

  2 in total
  56 in total

1.  Antisense inhibition of gene expression in cells by oligonucleotides incorporating locked nucleic acids: effect of mRNA target sequence and chimera design.

Authors:  Dwaine A Braasch; Yinghui Liu; David R Corey
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

2.  RecA-mediated, targeted mutagenesis in zebrafish.

Authors:  Zongbin Cui; Ying Yang; Christopher D Kaufman; Dritan Agalliu; Perry B Hackett
Journal:  Mar Biotechnol (NY)       Date:  2003 Mar-Apr       Impact factor: 3.619

Review 3.  Cilia in cell signaling and human disorders.

Authors:  Neil A Duldulao; Jade Li; Zhaoxia Sun
Journal:  Protein Cell       Date:  2010-08-28       Impact factor: 14.870

Review 4.  A tale of two models: mouse and zebrafish as complementary models for lymphatic studies.

Authors:  Jun-Dae Kim; Suk-Won Jin
Journal:  Mol Cells       Date:  2014-05-23       Impact factor: 5.034

5.  Cadherin-4 plays a role in the development of zebrafish cranial ganglia and lateral line system.

Authors:  Amy L Wilson; Yu-Chi Shen; S G Babb-Clendenon; Jason Rostedt; Bei Liu; Kate F Barald; James A Marrs; Qin Liu
Journal:  Dev Dyn       Date:  2007-03       Impact factor: 3.780

6.  Ectodermal P2X receptor function plays a pivotal role in craniofacial development of the zebrafish.

Authors:  Sarah Kucenas; Jane A Cox; Florentina Soto; Angela Lamora; Mark M Voigt
Journal:  Purinergic Signal       Date:  2009-06-16       Impact factor: 3.765

7.  Differential expression of photoreceptor-specific genes in the retina of a zebrafish cadherin2 mutant glass onion and zebrafish cadherin4 morphants.

Authors:  Q Liu; R A Frey; S G Babb-Clendenon; B Liu; J Francl; A L Wilson; J A Marrs; D L Stenkamp
Journal:  Exp Eye Res       Date:  2006-10-30       Impact factor: 3.467

8.  Cadherin-7 function in zebrafish development.

Authors:  Qin Liu; James A Marrs; Richard L Londraville; Amy L Wilson
Journal:  Cell Tissue Res       Date:  2008-07-30       Impact factor: 5.249

9.  Knockdown of leptin A expression dramatically alters zebrafish development.

Authors:  Qin Liu; Mark Dalman; Yun Chen; Mashal Akhter; Sravya Brahmandam; Yesha Patel; Josef Lowe; Mitesh Thakkar; Akil-Vuai Gregory; Daryllanae Phelps; Caitlin Riley; Richard L Londraville
Journal:  Gen Comp Endocrinol       Date:  2012-07-25       Impact factor: 2.822

10.  Fish-specific duplicated dmrt2b contributes to a divergent function through Hedgehog pathway and maintains left-right asymmetry establishment function.

Authors:  Sha Liu; Zhi Li; Jian-Fang Gui
Journal:  PLoS One       Date:  2009-09-30       Impact factor: 3.240

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