Literature DB >> 11112486

Construction and biological characterization of infectious molecular clones of HIV-1 subtypes B and E (CRF01_AE) generated by the polymerase chain reaction.

M O Salminen1, P K Ehrenberg, J R Mascola, D E Dayhoff, R Merling, B Blake, M Louder, S Hegerich, V R Polonis, D L Birx, M L Robb, F E McCutchan, N L Michael.   

Abstract

We previously described the use of extended polymerase chain reaction (PCR) to amplify contiguous 9.2-kilobase (kb) single-long terminal repeat (LTR) proviral sequences from HIV-1 genetic subtypes A through G. We now extend these findings by describing a novel vector system to recover infectious molecular clones from long PCR amplicons. Directional ligation of 9.2-kb proviral amplicons into a recovery vector reconstitutes missing LTR sequences, providing candidate molecular clones for infectivity screening. We show that a previously characterized infectious molecular clone of HIV-1 retains its biological properties upon recovery with this strategy. Three additional infectious molecular clones generated, from primary isolates of subtype B (HIV-1(WR27)) and circulating recombinant form 01_AE (subtype E) (HIV-1(CM235)) by subtype-specific LTR reconstitution, displayed biological properties reflecting their cognate parental isolates. This represents the first report of infectious molecular clones from circulating recombinant form 01_AE (subtype E). Copyright 2000 Academic Press.

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Year:  2000        PMID: 11112486     DOI: 10.1006/viro.2000.0640

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  13 in total

1.  Infectious molecular clone of a recently transmitted pediatric human immunodeficiency virus clade C isolate from Africa: evidence of intraclade recombination.

Authors:  Ricky D Grisson; Agnès-Laurence Chenine; Lan-Yu Yeh; Jun He; Charles Wood; Ganapati J Bhat; Weidong Xu; Chipepo Kankasa; Ruth M Ruprecht
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

2.  Neutralization Sensitivity of a Novel HIV-1 CRF01_AE Panel of Infectious Molecular Clones.

Authors:  Agnes-Laurence Chenine; Melanie Merbah; Lindsay Wieczorek; Sebastian Molnar; Brendan Mann; Jenica Lee; Anne-Marie OʼSullivan; Meera Bose; Eric Sanders-Buell; Gustavo H Kijak; Carolina Herrera; Robert McLinden; Robert J OʼConnell; Nelson L Michael; Merlin L Robb; Jerome H Kim; Victoria R Polonis; Sodsai Tovanabutra
Journal:  J Acquir Immune Defic Syndr       Date:  2018-07-01       Impact factor: 3.731

3.  HIV gp120 H375 is unique to HIV-1 subtype CRF01_AE and confers strong resistance to the entry inhibitor BMS-599793, a candidate microbicide drug.

Authors:  Susan M Schader; Susan P Colby-Germinario; Peter K Quashie; Maureen Oliveira; Ruxandra-Ilinca Ibanescu; Daniela Moisi; Thibault Mespléde; Mark A Wainberg
Journal:  Antimicrob Agents Chemother       Date:  2012-05-21       Impact factor: 5.191

4.  Human immunodeficiency virus type 1 DNA sequences genetically damaged by hypermutation are often abundant in patient peripheral blood mononuclear cells and may be generated during near-simultaneous infection and activation of CD4(+) T cells.

Authors:  M Janini; M Rogers; D R Birx; F E McCutchan
Journal:  J Virol       Date:  2001-09       Impact factor: 5.103

5.  Biologic and genetic characterization of a panel of 60 human immunodeficiency virus type 1 isolates, representing clades A, B, C, D, CRF01_AE, and CRF02_AG, for the development and assessment of candidate vaccines.

Authors:  Bruce K Brown; Janice M Darden; Sodsai Tovanabutra; Tamara Oblander; Julie Frost; Eric Sanders-Buell; Mark S de Souza; Deborah L Birx; Francine E McCutchan; Victoria R Polonis
Journal:  J Virol       Date:  2005-05       Impact factor: 5.103

6.  Detection of the HIV-1 Accessory Proteins Nef and Vpu by Flow Cytometry Represents a New Tool to Study Their Functional Interplay within a Single Infected CD4+ T Cell.

Authors:  Jérémie Prévost; Jonathan Richard; Romain Gasser; Halima Medjahed; Frank Kirchhoff; Beatrice H Hahn; John C Kappes; Christina Ochsenbauer; Ralf Duerr; Andrés Finzi
Journal:  J Virol       Date:  2022-01-26       Impact factor: 6.549

7.  The role of natural killer (NK) cells and NK cell receptor polymorphisms in the assessment of HIV-1 neutralization.

Authors:  Bruce K Brown; Lindsay Wieczorek; Gustavo Kijak; Kara Lombardi; Jeffrey Currier; Maggie Wesberry; John C Kappes; Viseth Ngauy; Mary Marovich; Nelson Michael; Christina Ochsenbauer; David C Montefiori; Victoria R Polonis
Journal:  PLoS One       Date:  2012-04-11       Impact factor: 3.240

8.  Impact of HIV-1 backbone on neutralization sensitivity: neutralization profiles of heterologous envelope glycoproteins expressed in native subtype C and CRF01_AE backbone.

Authors:  Agnès-Laurence Chenine; Lindsay Wieczorek; Eric Sanders-Buell; Maggie Wesberry; Teresa Towle; Devin M Pillis; Sebastian Molnar; Robert McLinden; Tara Edmonds; Ivan Hirsch; Robert O'Connell; Francine E McCutchan; David C Montefiori; Christina Ochsenbauer; John C Kappes; Jerome H Kim; Victoria R Polonis; Sodsai Tovanabutra
Journal:  PLoS One       Date:  2013-11-29       Impact factor: 3.240

9.  Isolation and characterization of a replication-competent molecular clone of an HIV-1 circulating recombinant form (CRF33_01B).

Authors:  Kok Keng Tee; Shigeru Kusagawa; Xiao-Jie Li; Narumi Onogi; Maya Isogai; Saiki Hase; Rie Uenishi; Huanan Liao; Adeeba Kamarulzaman; Yutaka Takebe
Journal:  PLoS One       Date:  2009-08-18       Impact factor: 3.240

10.  Human immunodeficiency virus type 1 efficiently binds to human fetal astrocytes and induces neuroinflammatory responses independent of infection.

Authors:  Jinliang Li; Galina Bentsman; Mary Jane Potash; David J Volsky
Journal:  BMC Neurosci       Date:  2007-05-12       Impact factor: 3.288

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