Literature DB >> 11092867

Mutations in catB, the gene encoding muconate cycloisomerase, activate transcription of the distal ben genes and contribute to a complex regulatory circuit in Acinetobacter sp. strain ADP1.

N J Cosper1, L S Collier, T J Clark, R A Scott, E L Neidle.   

Abstract

Mutants of the bacterium Acinetobacter sp. strain ADP1 were selected to grow on benzoate without the BenM transcriptional activator. In the wild type, BenM responds to benzoate and cis,cis-muconate to activate expression of the benABCDE operon, which is involved in benzoate catabolism. This operon encodes enzymes that convert benzoate to catechol, a compound subsequently degraded by cat gene-encoded enzymes. In this report, four spontaneous mutants were found to carry catB mutations that enabled BenM-independent growth on benzoate. catB encodes muconate cycloisomerase, an enzyme required for benzoate catabolism. Its substrate, cis,cis-muconate, is enzymatically produced from catechol by the catA-encoded catechol 1,2-dioxygenase. Muconate cycloisomerase was purified to homogeneity from the wild type and the catB mutants. Each purified enzyme was active, although there were differences in the catalytic properties of the wild type and variant muconate cycloisomerases. Strains with a chromosomal benA::lacZ transcriptional fusion were constructed and used to investigate how catB mutations affect growth on benzoate. All of the catB mutations increased cis,cis-muconate-activated ben gene expression in strains lacking BenM. A model is presented in which the catB mutations reduce muconate cycloisomerase activity during growth on benzoate, thereby increasing intracellular cis, cis-muconate concentrations. This, in turn, may allow CatM, an activator similar to BenM in sequence and function, to activate ben gene transcription. CatM normally responds to cis,cis-muconate to activate cat gene expression. Consistent with this model, muconate cylcoisomerase specific activities in cell extracts of benzoate-grown catB mutants were low relative to that of the wild type. Moreover, the catechol 1,2-dioxygenase activities of the mutants were elevated, which may result from CatM responding to the altered intracellular levels of cis,cis-muconate and increasing catA expression. Collectively, these results support the important role of metabolite concentrations in controlling benzoate degradation via a complex transcriptional regulatory circuit.

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Year:  2000        PMID: 11092867      PMCID: PMC94832          DOI: 10.1128/JB.182.24.7044-7052.2000

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticus.

Authors:  C E Romero-Arroyo; M A Schell; G L Gaines; E L Neidle
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

2.  Substrate specificity of and product formation by muconate cycloisomerases: an analysis of wild-type enzymes and engineered variants.

Authors:  M D Vollmer; H Hoier; H J Hecht; U Schell; J Gröning; A Goldman; M Schlömann
Journal:  Appl Environ Microbiol       Date:  1998-09       Impact factor: 4.792

3.  Construction of a lacZ-kanamycin-resistance cassette, useful for site-directed mutagenesis and as a promoter probe.

Authors:  W Kokotek; W Lotz
Journal:  Gene       Date:  1989-12-14       Impact factor: 3.688

4.  Improved broad-host-range plasmids for DNA cloning in gram-negative bacteria.

Authors:  N T Keen; S Tamaki; D Kobayashi; D Trollinger
Journal:  Gene       Date:  1988-10-15       Impact factor: 3.688

5.  Structural basis for the activity of two muconate cycloisomerase variants toward substituted muconates.

Authors:  U Schell; S Helin; T Kajander; M Schlömann; A Goldman
Journal:  Proteins       Date:  1999-01-01

6.  Novel nuclear magnetic resonance spectroscopy methods demonstrate preferential carbon source utilization by Acinetobacter calcoaceticus.

Authors:  G L Gaines; L Smith; E L Neidle
Journal:  J Bacteriol       Date:  1996-12       Impact factor: 3.490

7.  Similarities between the antABC-encoded anthranilate dioxygenase and the benABC-encoded benzoate dioxygenase of Acinetobacter sp. strain ADP1.

Authors:  B M Bundy; A L Campbell; E L Neidle
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

8.  Cloning and expression of Acinetobacter calcoaceticus catechol 1,2-dioxygenase structural gene catA in Escherichia coli.

Authors:  E L Neidle; L N Ornston
Journal:  J Bacteriol       Date:  1986-11       Impact factor: 3.490

9.  The refined X-ray structure of muconate lactonizing enzyme from Pseudomonas putida PRS2000 at 1.85 A resolution.

Authors:  S Helin; P C Kahn; B L Guha; D G Mallows; A Goldman
Journal:  J Mol Biol       Date:  1995-12-15       Impact factor: 5.469

10.  Cloning and complete nucleotide sequence determination of the catB gene encoding cis,cis-muconate lactonizing enzyme.

Authors:  T L Aldrich; B Frantz; J F Gill; J J Kilbane; A M Chakrabarty
Journal:  Gene       Date:  1987       Impact factor: 3.688

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  5 in total

1.  Synergistic transcriptional activation by one regulatory protein in response to two metabolites.

Authors:  Becky M Bundy; Lauren S Collier; Timothy R Hoover; Ellen L Neidle
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

2.  Importance of different tfd genes for degradation of chloroaromatics by Ralstonia eutropha JMP134.

Authors:  Iris Plumeier; Danilo Pérez-Pantoja; Sabina Heim; Bernardo González; Dietmar H Pieper
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

3.  CatM regulation of the benABCDE operon: functional divergence of two LysR-type paralogs in Acinetobacter baylyi ADP1.

Authors:  Obidimma C Ezezika; Lauren S Collier-Hyams; Haley A Dale; Andrew C Burk; Ellen L Neidle
Journal:  Appl Environ Microbiol       Date:  2006-03       Impact factor: 4.792

4.  Differential expression of two catechol 1,2-dioxygenases in Burkholderia sp. strain TH2.

Authors:  Katsuhisa Suzuki; Atsushi Ichimura; Naoto Ogawa; Akira Hasebe; Kiyotaka Miyashita
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

5.  Engineering CatM, a LysR-Type Transcriptional Regulator, to Respond Synergistically to Two Effectors.

Authors:  Melissa P Tumen-Velasquez; Nicole S Laniohan; Cory Momany; Ellen L Neidle
Journal:  Genes (Basel)       Date:  2019-05-31       Impact factor: 4.096

  5 in total

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