Literature DB >> 11086535

A 12,000 rad whole genome radiation hybrid panel for high resolution mapping in cattle: characterization of the centromeric end of chromosome 1.

C E Rexroad1, E K Owens, J S Johnson, J E Womack.   

Abstract

We have constructed a 12,000 rad bovine whole-genome radiation hybrid panel (BovR12) to complement the 5000 rad panel (BovR5) currently available to the bovine genomics research community. Initial characterization with markers from chromosome 1 reveals a higher frequency of breakage between adjacent markers and subsequently a larger number of 'linkage' groups on this chromosome. For this set of markers, the retention frequency is also higher than in BovR5.

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Year:  2000        PMID： 11086535     DOI： 10.1046/j.1365-2052.2000.00641.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN： 0268-9146            Impact factor:   3.169


  16 in total

1.  Exploiting plant somatic radiation hybrids for physical mapping of expressed sequence tags.

Authors:  J Wardrop; J Fuller; W Powell; G C Machray
Journal:  Theor Appl Genet       Date:  2003-09-25       Impact factor: 5.699

2.  Application of AFLP technology to radiation hybrid mapping.

Authors:  C Gorni; J L Williams; H C M Heuven; R Negrini; A Valentini; M J T van Eijk; D Waddington; M Zevenbergen; P Ajmone Marsan; J D Peleman
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

3.  Wide-cross whole-genome radiation hybrid mapping of the cotton (Gossypium barbadense L.) genome.

Authors:  Wenxiang Gao; Z Jeffrey Chen; John Z Yu; Russell J Kohel; James E Womack; David M Stelly
Journal:  Mol Genet Genomics       Date:  2005-12-16       Impact factor: 3.291

4.  An ordered comparative map of the cattle and human genomes.

Authors:  M R Band; J H Larson; M Rebeiz; C A Green; D W Heyen; J Donovan; R Windish; C Steining; P Mahyuddin; J E Womack; H A Lewin
Journal:  Genome Res       Date:  2000-09       Impact factor: 9.043

5.  A comparative radiation hybrid map of bovine chromosome 18 and homologous chromosomes in human and mice.

Authors:  Tom Goldammer; Srinivas R Kata; Ronald M Brunner; Ute Dorroch; Hanka Sanftleben; Manfred Schwerin; James E Womack
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

6.  Assignment of chromosomal locations for unassigned SNPs/scaffolds based on pair-wise linkage disequilibrium estimates.

Authors:  Mehar S Khatkar; Matthew Hobbs; Markus Neuditschko; Johann Sölkner; Frank W Nicholas; Herman W Raadsma
Journal:  BMC Bioinformatics       Date:  2010-04-07       Impact factor: 3.169

7.  Wide-cross whole-genome radiation hybrid mapping of cotton (Gossypium hirsutum L.).

Authors:  Wenxiang Gao; Z Jeffrey Chen; John Z Yu; Dwaine Raska; Russell J Kohel; James E Womack; David M Stelly
Journal:  Genetics       Date:  2004-07       Impact factor: 4.562

8.  A high resolution radiation hybrid map of bovine chromosome 14 identifies scaffold rearrangement in the latest bovine assembly.

Authors:  Elisa Marques; Simon de Givry; Paul Stothard; Brenda Murdoch; Zhiquan Wang; James Womack; Stephen S Moore
Journal:  BMC Genomics       Date:  2007-07-26       Impact factor: 3.969

9.  A high resolution RH map of the bovine major histocompatibility complex.

Authors:  Candice L Brinkmeyer-Langford; Christopher P Childers; Krista L Fritz; Ashley L Gustafson-Seabury; Marian Cothran; Terje Raudsepp; James E Womack; Loren C Skow
Journal:  BMC Genomics       Date:  2009-04-24       Impact factor: 3.969

10.  Identification of a two-marker-haplotype on Bos taurus autosome 18 associated with somatic cell score in German Holstein cattle.

Authors:  Bodo Brand; Christine Baes; Manfred Mayer; Norbert Reinsch; Christa Kühn
Journal:  BMC Genet       Date:  2009-09-02       Impact factor: 2.797
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