Literature DB >> 11084904

Comparative protein structure modeling. Introduction and practical examples with modeller.

R Sánchez1, A Sali.   

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Year:  2000        PMID: 11084904     DOI: 10.1385/1-59259-368-2:97

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


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  85 in total

1.  Detection of homologous proteins by an intermediate sequence search.

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Review 2.  Bioinformatics methods to predict protein structure and function. A practical approach.

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3.  Comparative protein structure modeling by iterative alignment, model building and model assessment.

Authors:  Bino John; Andrej Sali
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5.  A combined computational and functional approach identifies new residues involved in pH-dependent gating of ASIC1a.

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6.  Cullin neddylation may allosterically tune polyubiquitin chain length and topology.

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7.  Improvement of comparative model accuracy by free-energy optimization along principal components of natural structural variation.

Authors:  Bin Qian; Angel R Ortiz; David Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-18       Impact factor: 11.205

8.  Structure of a shark IgNAR antibody variable domain and modeling of an early-developmental isotype.

Authors:  Victor A Streltsov; Jennifer A Carmichael; Stewart D Nuttall
Journal:  Protein Sci       Date:  2005-09-30       Impact factor: 6.725

9.  Homology modeling of tubulin: influence predictions for microtubule's biophysical properties.

Authors:  Eric J Carpenter; J Torin Huzil; Richard F Ludueña; Jack A Tuszynski
Journal:  Eur Biophys J       Date:  2006-08-29       Impact factor: 1.733

10.  Identification of the PIP2-binding site on Kir6.2 by molecular modelling and functional analysis.

Authors:  Shozeb Haider; Andrei I Tarasov; Tim J Craig; Mark S P Sansom; Frances M Ashcroft
Journal:  EMBO J       Date:  2007-08-02       Impact factor: 11.598

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