Literature DB >> 11079910

A set-covering approach to specific search for literature about human genes.

T K Jenssen1, S Vinterbo.   

Abstract

With the advent of the cDNA microarray and oligonucleotide array technologies it has become possible to study a large number of genes in a single experiment. While experiments with thousands of genes are routinely performed, searching for literature about several genes by traditional methods is time consuming and error-prone. In addition to the inherent limitations of free text search, use of the conventional Boolean operators often result in either none (when AND'ing terms) or far too many (when OR'ing terms) hits. We have created a two-step procedure as an approach to meeting the challenge of multi-gene queries. Our results so far shows that the returned sets of articles scores high on relevance.

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Mesh:

Year:  2000        PMID: 11079910      PMCID: PMC2243706     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  3 in total

1.  The transcriptional program in the response of human fibroblasts to serum.

Authors:  V R Iyer; M B Eisen; D T Ross; G Schuler; T Moore; J C Lee; J M Trent; L M Staudt; J Hudson; M S Boguski; D Lashkari; D Shalon; D Botstein; P O Brown
Journal:  Science       Date:  1999-01-01       Impact factor: 47.728

2.  Quantitative monitoring of gene expression patterns with a complementary DNA microarray.

Authors:  M Schena; D Shalon; R W Davis; P O Brown
Journal:  Science       Date:  1995-10-20       Impact factor: 47.728

Review 3.  High density synthetic oligonucleotide arrays.

Authors:  R J Lipshutz; S P Fodor; T R Gingeras; D J Lockhart
Journal:  Nat Genet       Date:  1999-01       Impact factor: 38.330

  3 in total
  1 in total

1.  NLP-based information extraction for managing the molecular biology literature.

Authors:  Bisharah Libbus; Thomas C Rindflesch
Journal:  Proc AMIA Symp       Date:  2002
  1 in total

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