Literature DB >> 11076027

Protein-protein interactions in receptor activation and intracellular signalling.

T L Blundell1, D F Burke, D Chirgadze, V Dhanaraj, M Hyvönen, C A Innis, E Parisini, L Pellegrini, M Sayed, B L Sibanda.   

Abstract

We review here signalling complexes that we have defined using X-ray analysis in our laboratory. They include growth factors and their receptors: nerve growth factor (NGF) and its hetero-hexameric 7S NGF storage complex, hepatocyte growth factor/scatter factor (HGF/SF) NK1 dimers and fibroblast growth factor (FGF1) in complex with its receptor (FGFR2) ectodomain and heparin. We also review our recent structural studies on intracellular signalling complexes, focusing on phosducin transducin GPry, CK2 protein kinase and its complexes, and the cyclin D-dependent kinase, Cdk6, bound to the cell cycle inhibitor p19INK4d. Comparing the structures of these complexes with others we show that the surface area buried in signalling interactions does not always give a good indication of the strength of the interactions. We show that conformational changes are often important in complexes with intermediate buried surface areas of 1500 to 2000 A2, such as Cdk6INK4 interactions. Some interactions involve recognition of continuous epitopes, where there is no necessity for a tertiary structure and very often the binding conformation is induced during the process of interaction, for example phosducin binding to the betagamma subunits (Gtbetagamma) of the heterotrimeric G protein transducin.

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Year:  2000        PMID: 11076027     DOI: 10.1515/BC.2000.117

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  17 in total

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Review 2.  Understanding protein non-folding.

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Journal:  Biochim Biophys Acta       Date:  2010-02-01

Review 3.  Synthetic multivalent ligands as probes of signal transduction.

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4.  DNA-PKcs, Allostery, and DNA Double-Strand Break Repair: Defining the Structure and Setting the Stage.

Authors:  Dimitri Y Chirgadze; David B Ascher; Tom L Blundell; Bancinyane L Sibanda
Journal:  Methods Enzymol       Date:  2017-05-03       Impact factor: 1.600

Review 5.  Targeting intrinsically disordered proteins in neurodegenerative and protein dysfunction diseases: another illustration of the D(2) concept.

Authors:  Vladimir N Uversky
Journal:  Expert Rev Proteomics       Date:  2010-08       Impact factor: 3.940

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Journal:  Brief Bioinform       Date:  2022-07-18       Impact factor: 13.994

7.  Nrf2 activation through the inhibition of Keap1-Nrf2 protein-protein interaction.

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Journal:  Med Chem Res       Date:  2020-04-10       Impact factor: 1.965

8.  Macromolecular complexes in crystals and solutions.

Authors:  Evgeny Krissinel
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  Intrinsic disorder in PTEN and its interactome confers structural plasticity and functional versatility.

Authors:  Prerna Malaney; Ravi Ramesh Pathak; Bin Xue; Vladimir N Uversky; Vrushank Davé
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

10.  Molecular determinants of epidermal growth factor binding: a molecular dynamics study.

Authors:  Jeffrey M Sanders; Matthew E Wampole; Mathew L Thakur; Eric Wickstrom
Journal:  PLoS One       Date:  2013-01-24       Impact factor: 3.240

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