Literature DB >> 11074284

A genetic uncertainty problem.

D Tautz1.   

Abstract

The existence of genes that, when knocked out, result in no obvious phenotype has puzzled biologists for many years. The phenomenon is often ascribed to redundancy in regulatory networks, caused by duplicated genes. However, a recent systematic analysis of data from the yeast genome projects does not support a link between gene duplications and redundancies. An alternative explanation suggests that genes might also evolve by very weak selection, which would mean that their true function cannot be studied in normal laboratory experiments. This problem is comparable to Heisenberg's uncertainty relationship in physics. It is possible to formulate an analogous relationship for biology, which, at its extreme, predicts that the understanding of the full function of a gene might require experiments on an evolutionary scale, involving the entire effective population size of a given species.

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Year:  2000        PMID: 11074284     DOI: 10.1016/s0168-9525(00)02118-1

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  13 in total

1.  A question of size: the eukaryotic proteome and the problems in defining it.

Authors:  Paul M Harrison; Anuj Kumar; Ning Lang; Michael Snyder; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2002-03-01       Impact factor: 16.971

2.  A population threshold for functional polymorphisms.

Authors:  Gane Ka-Shu Wong; Zhiyong Yang; Douglas A Passey; Miho Kibukawa; Marcia Paddock; Chun-Rong Liu; Lars Bolund; Jun Yu
Journal:  Genome Res       Date:  2003-08       Impact factor: 9.043

Review 3.  The evolutionary origin of orphan genes.

Authors:  Diethard Tautz; Tomislav Domazet-Lošo
Journal:  Nat Rev Genet       Date:  2011-08-31       Impact factor: 53.242

Review 4.  Open questions in the study of de novo genes: what, how and why.

Authors:  Aoife McLysaght; Laurence D Hurst
Journal:  Nat Rev Genet       Date:  2016-07-25       Impact factor: 53.242

5.  A genomic-scale artificial microRNA library as a tool to investigate the functionally redundant gene space in Arabidopsis.

Authors:  Felix Hauser; Wenxiao Chen; Ulrich Deinlein; Kenneth Chang; Stephan Ossowski; Joffrey Fitz; Gregory J Hannon; Julian I Schroeder
Journal:  Plant Cell       Date:  2013-08-16       Impact factor: 11.277

6.  fzr-1 and lin-35/Rb function redundantly to control cell proliferation in C. elegans as revealed by a nonbiased synthetic screen.

Authors:  David S Fay; Sean Keenan; Min Han
Journal:  Genes Dev       Date:  2002-02-15       Impact factor: 11.361

7.  Divergence in gene regulation at young life history stages of whitefish (Coregonus sp.) and the emergence of genomic isolation.

Authors:  Arne W Nolte; Sébastien Renaut; Louis Bernatchez
Journal:  BMC Evol Biol       Date:  2009-03-16       Impact factor: 3.260

8.  Predicting genome-wide redundancy using machine learning.

Authors:  Huang-Wen Chen; Sunayan Bandyopadhyay; Dennis E Shasha; Kenneth D Birnbaum
Journal:  BMC Evol Biol       Date:  2010-11-18       Impact factor: 3.260

9.  Epigenetics: Biology's Quantum Mechanics.

Authors:  Richard A Jorgensen
Journal:  Front Plant Sci       Date:  2011-04-12       Impact factor: 5.753

10.  Effect of population heterogenization on the reproducibility of mouse behavior: a multi-laboratory study.

Authors:  S Helene Richter; Joseph P Garner; Benjamin Zipser; Lars Lewejohann; Norbert Sachser; Chadi Touma; Britta Schindler; Sabine Chourbaji; Christiane Brandwein; Peter Gass; Niek van Stipdonk; Johanneke van der Harst; Berry Spruijt; Vootele Võikar; David P Wolfer; Hanno Würbel
Journal:  PLoS One       Date:  2011-01-31       Impact factor: 3.240

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