Literature DB >> 11071952

End-specific covalent photo-dependent immobilisation of synthetic DNA to paramagnetic beads.

R Penchovsky1, E Birch-Hirschfeld, J S McCaskill.   

Abstract

A novel approach for light-dependent covalent immobilisation of synthetic DNA oligomers to amino-coated paramagnetic beads is described. A hetero-bifunctional photo-reactive cross-linking chemical, 4-nitrophenyl 3-diazopyruvate, is applied to attach 5' amino-modified DNA to both silica and polystyrene paramagnetic beads. The coupling yields are comparable with similar methods in which no photo-reactive chemicals are used. The immobilised DNA on the polystyrene and silica beads was used efficiently in hybridisation experiments. An extension of this approach to light-directed immobilisation of specific DNA to beads, located at different positions in micro-flow reactors, opens up a range of integrated applications to complex diagnostics, evolutionary biotechnology and novel areas such as DNA computing.

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Year:  2000        PMID: 11071952      PMCID: PMC113890          DOI: 10.1093/nar/28.22.e98

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

1.  Characterization of single-nucleotide polymorphisms in coding regions of human genes.

Authors:  M Cargill; D Altshuler; J Ireland; P Sklar; K Ardlie; N Patil; N Shaw; C R Lane; E P Lim; N Kalyanaraman; J Nemesh; L Ziaugra; L Friedland; A Rolfe; J Warrington; R Lipshutz; G Q Daley; E S Lander
Journal:  Nat Genet       Date:  1999-07       Impact factor: 38.330

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Authors:  S M Kalachikov; B A Adarichev; G M Dymshits
Journal:  Bioorg Khim       Date:  1992-01

3.  Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome.

Authors:  D G Wang; J B Fan; C J Siao; A Berno; P Young; R Sapolsky; G Ghandour; N Perkins; E Winchester; J Spencer; L Kruglyak; L Stein; L Hsie; T Topaloglou; E Hubbell; E Robinson; M Mittmann; M S Morris; N Shen; D Kilburn; J Rioux; C Nusbaum; S Rozen; T J Hudson; R Lipshutz; M Chee; E S Lander
Journal:  Science       Date:  1998-05-15       Impact factor: 47.728

4.  Molecular computation of solutions to combinatorial problems.

Authors:  L M Adleman
Journal:  Science       Date:  1994-11-11       Impact factor: 47.728

5.  Survey of four different photoreactive moieties for DNA photoaffinity labeling of yeast RNA polymerase III transcription complexes.

Authors:  J J Tate; J Persinger; B Bartholomew
Journal:  Nucleic Acids Res       Date:  1998-03-15       Impact factor: 16.971

6.  Development of a novel photoreactive calmodulin derivative: cross-linking of purified adenylate cyclase from bovine brain.

Authors:  J K Harrison; R G Lawton; M E Gnegy
Journal:  Biochemistry       Date:  1989-07-11       Impact factor: 3.162

7.  Assessment of methods for covalent binding of nucleic acids to magnetic beads, Dynabeads, and the characteristics of the bound nucleic acids in hybridization reactions.

Authors:  V Lund; R Schmid; D Rickwood; E Hornes
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

8.  Expression monitoring by hybridization to high-density oligonucleotide arrays.

Authors:  D J Lockhart; H Dong; M C Byrne; M T Follettie; M V Gallo; M S Chee; M Mittmann; C Wang; M Kobayashi; H Horton; E L Brown
Journal:  Nat Biotechnol       Date:  1996-12       Impact factor: 54.908

9.  Exploiting chemical libraries, structure, and genomics in the search for kinase inhibitors.

Authors:  N S Gray; L Wodicka; A M Thunnissen; T C Norman; S Kwon; F H Espinoza; D O Morgan; G Barnes; S LeClerc; L Meijer; S H Kim; D J Lockhart; P G Schultz
Journal:  Science       Date:  1998-07-24       Impact factor: 47.728

10.  p-Nitrophenyl 3-diazopyruvate and diazopyruvamides, a new family of photoactivatable cross-linking bioprobes.

Authors:  V S Goodfellow; M Settineri; R G Lawton
Journal:  Biochemistry       Date:  1989-07-25       Impact factor: 3.162

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  1 in total

1.  Detection of multiple human herpes viruses by DNA microarray technology.

Authors:  Zeno Földes-Papp; Renate Egerer; Eckhard Birch-Hirschfeld; Hans-Martin Striebel; Ulrike Demel; Gernot P Tilz; Peter Wutzler
Journal:  Mol Diagn       Date:  2004
  1 in total

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