Literature DB >> 11053857

Crystallization and preliminary X-ray crystallographic studies on the bacteriophage phi6 RNA-dependent RNA polymerase.

S J Butcher1, E V Makeyev, J M Grimes, D I Stuart, D H Bamford.   

Abstract

The RNA-dependent RNA polymerase (P2) from bacteriophage Phi6 has been cloned and the protein overexpressed in Escherichia coli to produce an active enzyme. A fully substituted selenomethionyl version of the protein has also been produced. Crystals of both proteins have been grown; most belong to the monoclinic space group P2(1), with unit-cell parameters a = 105.9, b = 94.0, c = 140.9 A, beta = 101.4 degrees, but some are trigonal (space group P3(1) or P3(2)), with unit-cell parameters a = b = 110.1, c = 159.4 A, gamma = 120 degrees. Both crystal forms occur in the same crystallization drop and are morphologically indistinguishable. Native data sets have been collected from both types of crystals to better than 3 A resolution.

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Year:  2000        PMID: 11053857     DOI: 10.1107/s0907444900010702

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  10 in total

1.  The polymerase subunit of a dsRNA virus plays a central role in the regulation of viral RNA metabolism.

Authors:  E V Makeyev; D H Bamford
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

2.  Comparison of polymerase subunits from double-stranded RNA bacteriophages.

Authors:  H Yang; E V Makeyev; D H Bamford
Journal:  J Virol       Date:  2001-11       Impact factor: 5.103

3.  Primer-independent RNA sequencing with bacteriophage phi6 RNA polymerase and chain terminators.

Authors:  E V Makeyev; D H Bamford
Journal:  RNA       Date:  2001-05       Impact factor: 4.942

4.  Nontemplated terminal nucleotidyltransferase activity of double-stranded RNA bacteriophage phi6 RNA-dependent RNA polymerase.

Authors:  Minna M Poranen; Minni R L Koivunen; Dennis H Bamford
Journal:  J Virol       Date:  2008-07-09       Impact factor: 5.103

5.  Noncatalytic ions direct the RNA-dependent RNA polymerase of bacterial double-stranded RNA virus ϕ6 from de novo initiation to elongation.

Authors:  Sam Wright; Minna M Poranen; Dennis H Bamford; David I Stuart; Jonathan M Grimes
Journal:  J Virol       Date:  2011-12-28       Impact factor: 5.103

6.  Bluetongue virus VP1 polymerase activity in vitro: template dependency, dinucleotide priming and cap dependency.

Authors:  Eiko Matsuo; Polly Roy
Journal:  PLoS One       Date:  2011-11-15       Impact factor: 3.240

7.  Characterization of the first double-stranded RNA bacteriophage infecting Pseudomonas aeruginosa.

Authors:  Yuhui Yang; Shuguang Lu; Wei Shen; Xia Zhao; Mengyu Shen; Yinling Tan; Gang Li; Ming Li; Jing Wang; Fuquan Hu; Shuai Le
Journal:  Sci Rep       Date:  2016-12-09       Impact factor: 4.379

8.  Mutations in the hepatitis C virus polymerase that increase RNA binding can confer resistance to cyclosporine A.

Authors:  Zhe Liu; John M Robida; Sreedhar Chinnaswamy; Guanghui Yi; Jason M Robotham; Heather B Nelson; Andre Irsigler; C Cheng Kao; Hengli Tang
Journal:  Hepatology       Date:  2009-07       Impact factor: 17.425

9.  The Stimulatory Mechanism of Hepatitis C Virus NS5A Protein on the NS5B Catalyzed Replication Reaction In Vitro.

Authors:  Elizabeth M Quezada; Caroline M Kane
Journal:  Open Biochem J       Date:  2013-01-31

10.  Structural explanation for the role of Mn2+ in the activity of phi6 RNA-dependent RNA polymerase.

Authors:  Minna M Poranen; Paula S Salgado; Minni R L Koivunen; Sam Wright; Dennis H Bamford; David I Stuart; Jonathan M Grimes
Journal:  Nucleic Acids Res       Date:  2008-10-21       Impact factor: 16.971

  10 in total

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