Literature DB >> 11051762

Exoribonucleases and their multiple roles in RNA metabolism.

M P Deutscher1, Z Li.   

Abstract

In recent years there has been a dramatic shift in our thinking about ribonucleases (RNases). Although they were once considered to be nonspecific, degradative enzymes, it is now clear that RNases play a central role in every aspect of cellular RNA metabolism, including decay of mRNA, conversion of RNA precursors to their mature forms, and end-turnover of certain RNAs. Recognition of the importance of this class of enzymes has led to an explosion of work and the establishment of significant new concepts. Thus, we now realize that RNases, both endoribonucleases and exoribonucleases, can be highly specific for particular sequences or structures. It has also become apparent that a single cell can contain a large number of distinct RNases, approaching as many as 20 members, often with overlapping specificities. Some RNases also have been found to be components of supramolecular complexes and to function in concert with other enzymes to carry out their role in RNA metabolism. This review focuses on the exoribonucleases, both prokaryotic and eukaryotic, and details their structure, catalytic properties, and physiological function.

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Substances:

Year:  2001        PMID: 11051762     DOI: 10.1016/s0079-6603(00)66027-0

Source DB:  PubMed          Journal:  Prog Nucleic Acid Res Mol Biol        ISSN: 0079-6603


  40 in total

Review 1.  Exoribonuclease superfamilies: structural analysis and phylogenetic distribution.

Authors:  Y Zuo; M P Deutscher
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

2.  A protein subunit of human RNase P, Rpp14, and its interacting partner, OIP2, have 3'-->5' exoribonuclease activity.

Authors:  Taijiao Jiang; Sidney Altman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

3.  RNA quality control: degradation of defective transfer RNA.

Authors:  Zhongwei Li; Stephan Reimers; Shilpa Pandit; Murray P Deutscher
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

Review 4.  mRNA decay in Escherichia coli comes of age.

Authors:  Sidney R Kushner
Journal:  J Bacteriol       Date:  2002-09       Impact factor: 3.490

5.  Novel role for RNase PH in the degradation of structured RNA.

Authors:  Chaitanya Jain
Journal:  J Bacteriol       Date:  2012-05-18       Impact factor: 3.490

6.  A Dicer-Independent Route for Biogenesis of siRNAs that Direct DNA Methylation in Arabidopsis.

Authors:  Ruiqiang Ye; Zulong Chen; Bi Lian; M Jordan Rowley; Ning Xia; Jijie Chai; Yan Li; Xin-Jian He; Andrzej T Wierzbicki; Yijun Qi
Journal:  Mol Cell       Date:  2015-12-17       Impact factor: 17.970

7.  The sequences and activities of RegB endoribonucleases of T4-related bacteriophages.

Authors:  Lina Piesiniene; Lidija Truncaite; Aurelija Zajanckauskaite; Rimas Nivinskas
Journal:  Nucleic Acids Res       Date:  2004-10-14       Impact factor: 16.971

8.  Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli.

Authors:  Mikhail Bubunenko; Teresa Baker; Donald L Court
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

9.  Balance between transcription and RNA degradation is vital for Saccharomyces cerevisiae mitochondria: reduced transcription rescues the phenotype of deficient RNA degradation.

Authors:  Agata T Rogowska; Olga Puchta; Anna M Czarnecka; Aneta Kaniak; Piotr P Stepien; Pawel Golik
Journal:  Mol Biol Cell       Date:  2005-12-21       Impact factor: 4.138

10.  Exonucleolytic degradation of double-stranded RNA by an activity in Xenopus laevis germinal vesicles.

Authors:  Paolo Fruscoloni; Michela Zamboni; M Irene Baldi; Glauco P Tocchini-Valentini
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-10       Impact factor: 11.205

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