Literature DB >> 12578969

Exonucleolytic degradation of double-stranded RNA by an activity in Xenopus laevis germinal vesicles.

Paolo Fruscoloni1, Michela Zamboni, M Irene Baldi, Glauco P Tocchini-Valentini.   

Abstract

We have identified, in extracts from Xenopus laevis germinal vesicles, a 5' exonuclease activity that cleaves double-stranded RNA (dsRNA). Features of the 5' ends of dsRNAs determine whether the strands are symmetrically or asymmetrically degraded. The activity hydrolyzes in the 5' to 3' direction, releasing 5'-mononucleotides processively, favoring strands with 5'-monophosphate termini; molecules with capped ends are resistant to digestion. Because of its ability to processively digest dsRNA to mononucleotides, we have named the exonuclease Chipper, which could cooperate or compete with Dicer (an endonuclease that produces molecules with a 5'-phosphate) in the processing of dsRNA.

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Year:  2003        PMID: 12578969      PMCID: PMC149885          DOI: 10.1073/pnas.252777499

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Molecular biology. Glimpses of a tiny RNA world.

Authors:  G Ruvkun
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

2.  Identification of novel genes coding for small expressed RNAs.

Authors:  M Lagos-Quintana; R Rauhut; W Lendeckel; T Tuschl
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

3.  A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA.

Authors:  G Hutvágner; J McLachlan; A E Pasquinelli; E Bálint; T Tuschl; P D Zamore
Journal:  Science       Date:  2001-07-12       Impact factor: 47.728

4.  Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells.

Authors:  Patrick J Paddison; Amy A Caudy; Emily Bernstein; Gregory J Hannon; Douglas S Conklin
Journal:  Genes Dev       Date:  2002-04-15       Impact factor: 11.361

5.  U6 promoter-driven siRNAs with four uridine 3' overhangs efficiently suppress targeted gene expression in mammalian cells.

Authors:  Makoto Miyagishi; Kazunari Taira
Journal:  Nat Biotechnol       Date:  2002-05       Impact factor: 54.908

6.  A DNA vector-based RNAi technology to suppress gene expression in mammalian cells.

Authors:  Guangchao Sui; Christina Soohoo; El Bachir Affar; Frédérique Gay; Yujiang Shi; William C Forrester; Yang Shi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

Review 7.  PKR; a sentinel kinase for cellular stress.

Authors:  B R Williams
Journal:  Oncogene       Date:  1999-11-01       Impact factor: 9.867

8.  miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs.

Authors:  Zissimos Mourelatos; Josée Dostie; Sergey Paushkin; Anup Sharma; Bernard Charroux; Linda Abel; Juri Rappsilber; Matthias Mann; Gideon Dreyfuss
Journal:  Genes Dev       Date:  2002-03-15       Impact factor: 11.361

9.  An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans.

Authors:  N C Lau; L P Lim; E G Weinstein; D P Bartel
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

10.  An extensive class of small RNAs in Caenorhabditis elegans.

Authors:  R C Lee; V Ambros
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

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  2 in total

1.  Hairpin transcription does not necessarily lead to efficient triggering of the RNAi pathway.

Authors:  Athanasios Dalakouras; Maria Tzanopoulou; Mina Tsagris; Michael Wassenegger; Kriton Kalantidis
Journal:  Transgenic Res       Date:  2010-06-26       Impact factor: 2.788

2.  Pathogenicity and virulence of West Nile virus revisited eight decades after its first isolation.

Authors:  Juan-Carlos Saiz; Miguel A Martín-Acebes; Ana B Blázquez; Estela Escribano-Romero; Teresa Poderoso; Nereida Jiménez de Oya
Journal:  Virulence       Date:  2021-12       Impact factor: 5.882

  2 in total

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