Literature DB >> 11008887

Hydration of beta-cyclodextrin: a molecular dynamics simulation study.

R G Winkler1, S Fioravanti, G Ciccotti, C Margheritis, M Villa.   

Abstract

We study by molecular dynamics simulations the hydration of beta-cyclodextrin. Our simulations show that within these barrel-shaped molecules hydrophobicity dominates, while at the top and bottom sides of the barrel interactions with water are mostly hydrophilic in nature. These results agree with crystallographic data at 120 K and, in particular, with the spontaneous hydration process of a cyclodextrin crystal in wet atmosphere. The predicted structure of the hydration shells is discussed and compared with previous molecular mechanics calculations which report an overall hydrophobic behavior. Moreover, the temperature dependence of the hydration process is discussed.

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Year:  2000        PMID: 11008887     DOI: 10.1023/a:1008155230143

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  6 in total

1.  Canonical dynamics: Equilibrium phase-space distributions.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1985-03

2.  Conformational differences between alpha-cyclodextrin in aqueous solution and in crystalline form. A molecular dynamics study.

Authors:  J E Koehler; W Saenger; W F van Gunsteren
Journal:  J Mol Biol       Date:  1988-09-05       Impact factor: 5.469

3.  The conformational behaviour of complexes of alpha-cyclodextrin with p-chlorophenol and p-hydroxybenzoic acid in water as studied by molecular dynamics simulations.

Authors:  S P van Helden; B P van Eijck; L H Janssen
Journal:  J Biomol Struct Dyn       Date:  1992-06

4.  A molecular dynamics simulation of crystalline alpha-cyclodextrin hexahydrate.

Authors:  J E Koehler; W Saenger; W F van Gunsteren
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

5.  Molecular dynamics simulation of crystalline beta-cyclodextrin dodecahydrate at 293 K and 120 K.

Authors:  J E Koehler; W Saenger; W F van Gunsteren
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

6.  Crystalline beta-cyclodextrin.12H2O reversibly dehydrates to beta-cyclodextrin.10.5 H2O under ambient conditions.

Authors:  T Steiner; G Koellner; S Ali; D Zakim; W Saenger
Journal:  Biochem Biophys Res Commun       Date:  1992-11-16       Impact factor: 3.575

  6 in total
  2 in total

1.  Dissolution studies of physical mixtures of indomethacin with alpha- and gamma-cyclodextrins.

Authors:  Edina Vranić; Alija Uzunović
Journal:  Bosn J Basic Med Sci       Date:  2010-08       Impact factor: 3.363

2.  Structural behaviour of 2-hydroxypropyl-beta-cyclodextrin in water: molecular dynamics simulation studies.

Authors:  Chin Weng Yong; Clive Washington; William Smith
Journal:  Pharm Res       Date:  2007-12-28       Impact factor: 4.200

  2 in total

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