Literature DB >> 11001872

Automated extraction and amplification of DNA from whole blood using a robotic workstation and an integrated thermocycler.

M L Smit1, B A Giesendorf, S G Heil, J A Vet, F J Trijbels, H J Blom.   

Abstract

Growing knowledge of the genetic basis of inheritable diseases has resulted in a rapidly increasing demand for DNA mutation analysis. Current methods are reliable and suitable for low-throughput mutation analyses, but are unable to cope with the increasing demand for genetic analyses, necessitating the development of new, fully automated and reliable methods. We developed a semi-automated method for DNA mutation analysis by integrating a thermocycler into a robotic pipetting workstation. DNA was extracted from 84 samples of 10 microl of EDTA-treated whole blood using magnetic beads within 2 h. Directly after isolation, the DNA was automatically transferred to an integrated thermocycler for amplification. Our semi-automated method proved to be reliable and robust, showing unambiguously interpretable PCR signals without occurrence of contamination. It is also faster than conventional manual methods. Only a brief manual intervention is required to remove and refit the seal of the PCR plate. This semi-automated assay is a step forward in the development of fully automated assays for DNA mutation analysis.

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Year:  2000        PMID: 11001872     DOI: 10.1042/ba20000043

Source DB:  PubMed          Journal:  Biotechnol Appl Biochem        ISSN: 0885-4513            Impact factor:   2.431


  5 in total

1.  Comparison of commercial DNA extraction kits for extraction of bacterial genomic DNA from whole-blood samples.

Authors:  K Smith; M A Diggle; S C Clarke
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

Review 2.  Formation of magnetite by bacteria and its application.

Authors:  Atsushi Arakaki; Hidekazu Nakazawa; Michiko Nemoto; Tetsushi Mori; Tadashi Matsunaga
Journal:  J R Soc Interface       Date:  2008-09-06       Impact factor: 4.118

3.  Design criteria for developing low-resource magnetic bead assays using surface tension valves.

Authors:  Nicholas M Adams; Amy E Creecy; Catherine E Majors; Bathsheba A Wariso; Philip A Short; David W Wright; Frederick R Haselton
Journal:  Biomicrofluidics       Date:  2013-01-18       Impact factor: 2.800

4.  Symmetrical corticobasal syndrome caused by a novel C.314dup progranulin mutation.

Authors:  Elise G P Dopper; Harro Seelaar; Wang Zheng Chiu; Inge de Koning; Rick van Minkelen; Matthew C Baker; Annemieke J M Rozemuller; Rosa Rademakers; John C van Swieten
Journal:  J Mol Neurosci       Date:  2011-08-24       Impact factor: 3.444

5.  Breakpoint mapping of 13 large parkin deletions/duplications reveals an exon 4 deletion and an exon 7 duplication as founder mutations.

Authors:  Peter Elfferich; Marja C Verleun-Mooijman; J Anneke Maat-Kievit; Bart P C van de Warrenburg; Wilson F Abdo; Sylvia A Eshuis; Klaus L Leenders; Ad Hovestadt; Jan C M Zijlmans; Jan-Pieter M Stroy; John C van Swieten; Agnita J W Boon; Klaartje van Engelen; Corien C Verschuuren-Bemelmans; Saskia A J Lesnik-Oberstein; Cristina Tassorelli; Leonardo Lopiano; Vincenzo Bonifati; Dennis Dooijes; Rick van Minkelen
Journal:  Neurogenetics       Date:  2011-10-13       Impact factor: 2.660

  5 in total

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