Literature DB >> 11000427

FT-IR microspectroscopy for microbiological studies.

F Orsini1, D Ami, A M Villa, G Sala, M G Bellotti, S M Doglia.   

Abstract

In this article we present an infrared microspectroscopic investigation on Candida albicans microcolonies, taken as a model system for studies on other microorganisms. Excellent Fourier transform infrared (FT-IR) absorption spectra from 4000 to 850 cm(-1) have been collected in only 20 s from sampling areas of 100x100 microm(2) in microcolonies, which had been transferred from the agar plate onto zinc selenide (ZnSe) windows. When different regions within a single microcolony were investigated, absorption spectra with important differences in the carbohydrate absorption (from 1200 to 850 cm(-1)) were detected for the cells in the center and in the periphery of the colony. Results obtained on microcolonies grown on solid agar with increasing dextrose concentrations indicated that the observed spectral heterogeneity was related to differences in dextrose uptake, which was lower for the old cells in the center of the colony than for the metabolically active cells at the periphery. Although it is otherwise difficult to quantitatively evaluate the dextrose uptake in a microcolony, FT-IR absorption microspectroscopy offers a new and rapid method for the analysis of this process. The possibility of studying highly absorbing colonies by attenuated total reflection (ATR) by means of an ATR microscope germanium objective is also presented here for the first time. An evaluation of the contact area sampled by this technique is reported with a discussion of the spatial resolution, the quality and the potential of the ATR measurements.

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Year:  2000        PMID: 11000427     DOI: 10.1016/s0167-7012(00)00168-8

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  12 in total

1.  Investigating microbial (micro)colony heterogeneity by vibrational spectroscopy.

Authors:  L P Choo-Smith; K Maquelin; T van Vreeswijk; H A Bruining; G J Puppels; N A Ngo Thi; C Kirschner; D Naumann; D Ami; A M Villa; F Orsini; S M Doglia; H Lamfarraj; G D Sockalingum; M Manfait; P Allouch; H P Endtz
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

2.  Use of Fourier-transform infrared spectroscopy for typing of Candida albicans strains isolated in intensive care units.

Authors:  C Sandt; G D Sockalingum; D Aubert; H Lepan; C Lepouse; M Jaussaud; A Leon; J M Pinon; M Manfait; D Toubas
Journal:  J Clin Microbiol       Date:  2003-03       Impact factor: 5.948

3.  Structure, stability, and aggregation of β-2 microglobulin mutants: insights from a Fourier transform infrared study in solution and in the crystalline state.

Authors:  Diletta Ami; Stefano Ricagno; Martino Bolognesi; Vittorio Bellotti; Silvia Maria Doglia; Antonino Natalello
Journal:  Biophys J       Date:  2012-04-03       Impact factor: 4.033

4.  Application of FT-IR spectroscopy for control of the medium composition during the biodegradation of nitro aromatic compounds.

Authors:  Mara Grube; Olga Muter; Silvija Strikauska; Marita Gavare; Baiba Limane
Journal:  J Ind Microbiol Biotechnol       Date:  2008-08-20       Impact factor: 3.346

5.  MIR spectroscopy as alternative method for further confirmation of foodborne pathogens Salmonella spp. and Listeria monocytogenes.

Authors:  Catarina Moreirinha; Joana Trindade; Jorge A Saraiva; Adelaide Almeida; Ivonne Delgadillo
Journal:  J Food Sci Technol       Date:  2018-07-09       Impact factor: 2.701

6.  Evaluation of Chemical Changes in Laboratory-Induced Colistin-Resistant Klebsiella pneumoniae.

Authors:  Agata Pruss; Paweł Kwiatkowski; Łukasz Łopusiewicz; Helena Masiuk; Peter Sobolewski; Karol Fijałkowski; Monika Sienkiewicz; Adam Smolak; Stefania Giedrys-Kalemba; Barbara Dołęgowska
Journal:  Int J Mol Sci       Date:  2021-07-01       Impact factor: 5.923

7.  A major role for side-chain polyglutamine hydrogen bonding in irreversible ataxin-3 aggregation.

Authors:  Antonino Natalello; Anna Maria Frana; Annalisa Relini; Alessandra Apicella; Gaetano Invernizzi; Carlo Casari; Alessandra Gliozzi; Silvia Maria Doglia; Paolo Tortora; Maria Elena Regonesi
Journal:  PLoS One       Date:  2011-04-13       Impact factor: 3.240

8.  Synchrotron based phase contrast X-ray imaging combined with FTIR spectroscopy reveals structural and biomolecular differences in spikelets play a significant role in resistance to Fusarium in wheat.

Authors:  Rachid Lahlali; Chithra Karunakaran; Lipu Wang; Ian Willick; Marina Schmidt; Xia Liu; Ferenc Borondics; Lily Forseille; Pierre R Fobert; Karen Tanino; Gary Peng; Emil Hallin
Journal:  BMC Plant Biol       Date:  2015-01-28       Impact factor: 4.215

9.  Merging FT-IR and NGS for simultaneous phenotypic and genotypic identification of pathogenic Candida species.

Authors:  Claudia Colabella; Laura Corte; Luca Roscini; Volha Shapaval; Achim Kohler; Valeria Tafintseva; Carlo Tascini; Gianluigi Cardinali
Journal:  PLoS One       Date:  2017-12-04       Impact factor: 3.240

Review 10.  Rapid clinical bacteriology and its future impact.

Authors:  Alex van Belkum; Géraldine Durand; Michel Peyret; Sonia Chatellier; Gilles Zambardi; Jacques Schrenzel; Dee Shortridge; Anette Engelhardt; William Michael Dunne
Journal:  Ann Lab Med       Date:  2012-12-17       Impact factor: 3.464

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