Literature DB >> 10984447

Automation for genomics, part two: sequencers, microarrays, and future trends.

D Meldrum1.   

Abstract

Automation for genomics has enabled a 43-fold increase in the total finished human genomic sequence in the world in the past four years. This is the second half of a two-part, noncomprehensive review that presents an overview of different types of automation equipment used in genome sequencing. The first part of the review, published in the previous issue, focused on automated procedures used to prepare DNA for sequencing or analysis. This second part of the review presents a look at available DNA sequencers and array technology and concludes with a look at future technologies. Alternate sequencing technologies including mass spectrometry, biochips, and single molecule analysis are included in this review.

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Year:  2000        PMID: 10984447     DOI: 10.1101/gr.157400

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  8 in total

1.  A scalable high-throughput chemical synthesizer.

Authors:  Eric A Livesay; Ying-Horng Liu; Kevin J Luebke; Joel Irick; Yuri Belosludtsev; Simon Rayner; Robert Balog; Stephen Albert Johnston
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

2.  Fluorescence spectral properties of labeled thiolated oligonucleotides bound to silver particles.

Authors:  Joanna Malicka; Ignacy Gryczynski; Joseph R Lakowicz
Journal:  Biopolymers       Date:  2004-06-15       Impact factor: 2.505

3.  Evaluation of methods for sequence analysis of highly repetitive DNA templates.

Authors:  John W Hawes; Kevin L Knudtson; Helaman Escobar; George S Grills; Timothy C Hunter; Emily Jackson-Machelski; Heather Lin; David S Needleman; Rashmi Pershad; Glenis J Wiebe
Journal:  J Biomol Tech       Date:  2006-04

4.  MEGAN analysis of metagenomic data.

Authors:  Daniel H Huson; Alexander F Auch; Ji Qi; Stephan C Schuster
Journal:  Genome Res       Date:  2007-01-25       Impact factor: 9.043

Review 5.  Keeping up with the next generation: massively parallel sequencing in clinical diagnostics.

Authors:  John R ten Bosch; Wayne W Grody
Journal:  J Mol Diagn       Date:  2008-10-02       Impact factor: 5.568

Review 6.  Comprehensive gene expression analysis by transcript profiling.

Authors:  Jonathan Donson; Yiwen Fang; Gregg Espiritu-Santo; Weimei Xing; Andres Salazar; Susie Miyamoto; Veronica Armendarez; Wayne Volkmuth
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

7.  MetaSim: a sequencing simulator for genomics and metagenomics.

Authors:  Daniel C Richter; Felix Ott; Alexander F Auch; Ramona Schmid; Daniel H Huson
Journal:  PLoS One       Date:  2008-10-08       Impact factor: 3.240

Review 8.  Unlocking the efficiency of genomics laboratories with robotic liquid-handling.

Authors:  Houriiyah Tegally; James Emmanuel San; Jennifer Giandhari; Tulio de Oliveira
Journal:  BMC Genomics       Date:  2020-10-20       Impact factor: 3.969

  8 in total

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