Literature DB >> 10980570

A new human genetic resource: a DNA bank established as part of the Avon longitudinal study of pregnancy and childhood (ALSPAC).

R W Jones1, S Ring, L Tyfield, R Hamvas, H Simmons, M Pembrey, J Golding.   

Abstract

We describe a unique human DNA resource forming part of the Avon Longitudinal Study of Pregnancy and Childhood (ALSPAC), a longitudinal cohort study involving 14 000 children and their families living in a geographically defined area of England. The DNA bank will underpin the search for associations between genetic polymorphisms and common health outcomes. The opportunities to collect blood samples suitable for DNA extraction are necessarily limited, and the samples themselves have often been treated in different ways and have varied storage histories. With the need to maximise yields, the choice of DNA extraction method is critical to the success of the bank and we have investigated the suitability of various commercial and in-house methods of DNA extraction. Various steps have been taken to minimise errors in sample address and identification, including the use of a pipetting robot for dilution and transfer of samples between 96-well arrays to provide aliquots suitable for PCR. The robot has been programmed to cope with concentrated viscous DNA solutions.

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Year:  2000        PMID: 10980570     DOI: 10.1038/sj.ejhg.5200502

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  43 in total

1.  Perinatal folate-related exposures and risk of psychotic symptoms in the ALSPAC birth cohort.

Authors:  B Glaser; A E Ades; S Lewis; P Emmet; G Lewis; G Davey Smith; S Zammit
Journal:  Schizophr Res       Date:  2010-04-24       Impact factor: 4.939

2.  Two British women studies replicated the association between the Val66Met polymorphism in the brain-derived neurotrophic factor (BDNF) and BMI.

Authors:  Yin Yao Shugart; Lina Chen; Ian N M Day; Sarah J Lewis; Nicholas J Timpson; Wei Yuan; Mohammad Reza Abdollahi; Sue M Ring; Shah Ebrahim; Jean Golding; Debbie A Lawlor; George Davey-Smith
Journal:  Eur J Hum Genet       Date:  2009-02-11       Impact factor: 4.246

3.  Ghrelin receptor gene polymorphisms and body size in children and adults.

Authors:  Edwin A Garcia; Barbara Heude; Clive J Petry; Maria Gueorguiev; Zaki K Hassan-Smith; Antigoni Spanou; Susan M Ring; David B Dunger; Nicholas Wareham; Manjinder S Sandhu; Ken K Ong; Márta Korbonits
Journal:  J Clin Endocrinol Metab       Date:  2008-07-22       Impact factor: 5.958

4.  Maternal inheritance of a promoter variant in the imprinted PHLDA2 gene significantly increases birth weight.

Authors:  Miho Ishida; David Monk; Andrew J Duncan; Sayeda Abu-Amero; Jiehan Chong; Susan M Ring; Marcus E Pembrey; Peter C Hindmarsh; John C Whittaker; Philip Stanier; Gudrun E Moore
Journal:  Am J Hum Genet       Date:  2012-03-22       Impact factor: 11.025

5.  Carrier status for the common R501X and 2282del4 filaggrin mutations is not associated with hearing phenotypes in 5,377 children from the ALSPAC cohort.

Authors:  Santiago Rodriguez; Amanda J Hall; Raquel Granell; W H Irwin McLean; Alan D Irvine; Colin N A Palmer; George Davey Smith; John Henderson; Ian N M Day
Journal:  PLoS One       Date:  2009-06-03       Impact factor: 3.240

6.  A non-synonymous variant in ADH1B is strongly associated with prenatal alcohol use in a European sample of pregnant women.

Authors:  Luisa Zuccolo; Nicola Fitz-Simon; Ron Gray; Susan M Ring; Kapil Sayal; George Davey Smith; Sarah J Lewis
Journal:  Hum Mol Genet       Date:  2009-08-17       Impact factor: 6.150

Review 7.  Glutathione-S-transferase genes and asthma phenotypes: a Human Genome Epidemiology (HuGE) systematic review and meta-analysis including unpublished data.

Authors:  Cosetta Minelli; Raquel Granell; Roger Newson; Matthew J Rose-Zerilli; Maties Torrent; Sue M Ring; John W Holloway; Seif O Shaheen; John A Henderson
Journal:  Int J Epidemiol       Date:  2009-12-23       Impact factor: 7.196

8.  Umbilical cord PUFA are determined by maternal and child fatty acid desaturase (FADS) genetic variants in the Avon Longitudinal Study of Parents and Children (ALSPAC).

Authors:  Eva Lattka; Berthold Koletzko; Sonja Zeilinger; Joseph R Hibbeln; Norman Klopp; Susan M Ring; Colin D Steer
Journal:  Br J Nutr       Date:  2012-08-09       Impact factor: 3.718

9.  Genome-wide prediction of childhood asthma and related phenotypes in a longitudinal birth cohort.

Authors:  Ben D Spycher; John Henderson; Raquel Granell; David M Evans; George Davey Smith; Nicholas J Timpson; Jonathan A C Sterne
Journal:  J Allergy Clin Immunol       Date:  2012-08       Impact factor: 10.793

10.  CMIP and ATP2C2 modulate phonological short-term memory in language impairment.

Authors:  Dianne F Newbury; Laura Winchester; Laura Addis; Silvia Paracchini; Lyn-Louise Buckingham; Ann Clark; Wendy Cohen; Hilary Cowie; Katharina Dworzynski; Andrea Everitt; Ian M Goodyer; Elizabeth Hennessy; A David Kindley; Laura L Miller; Jamal Nasir; Anne O'Hare; Duncan Shaw; Zoe Simkin; Emily Simonoff; Vicky Slonims; Jocelynne Watson; Jiannis Ragoussis; Simon E Fisher; Jonathon R Seckl; Peter J Helms; Patrick F Bolton; Andrew Pickles; Gina Conti-Ramsden; Gillian Baird; Dorothy V M Bishop; Anthony P Monaco
Journal:  Am J Hum Genet       Date:  2009-07-30       Impact factor: 11.025

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