Literature DB >> 10968985

Model energy landscapes and the force-induced dissociation of ligand-receptor bonds.

T Strunz1, K Oroszlan, I Schumakovitch, H Güntherodt, M Hegner.   

Abstract

We discuss models for the force-induced dissociation of a ligand-receptor bond, occurring in the context of cell adhesion or single molecule unbinding force measurements. We consider a bond with a structured energy landscape which is modeled by a network of force dependent transition rates between intermediate states. The behavior of a model with only one intermediate state and a model describing a molecular zipper is studied. We calculate the bond lifetime as a function of an applied force and unbinding forces under an increasing applied load and determine the relationship between both quantities. The dissociation via an intermediate state can lead to distinct functional relations of the bond lifetime on force. One possibility is the occurrence of three force regimes where the lifetime of the bond is determined by different transitions within the energy landscape. This case can be related to recent experimental observations of the force-induced dissociation of single avidin-biotin bonds.

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Year:  2000        PMID: 10968985      PMCID: PMC1301017          DOI: 10.1016/s0006-3495(00)76375-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  24 in total

Review 1.  Kinetics and mechanics of cell adhesion.

Authors:  C Zhu
Journal:  J Biomech       Date:  2000-01       Impact factor: 2.712

2.  Energy landscapes of biomolecular adhesion and receptor anchoring at interfaces explored with dynamic force spectroscopy.

Authors:  E Evans
Journal:  Faraday Discuss       Date:  1998       Impact factor: 4.008

3.  Mechanical and chemical unfolding of a single protein: a comparison.

Authors:  M Carrion-Vazquez; A F Oberhauser; S B Fowler; P E Marszalek; S E Broedel; J Clarke; J M Fernandez
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

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Review 5.  Models for the specific adhesion of cells to cells.

Authors:  G I Bell
Journal:  Science       Date:  1978-05-12       Impact factor: 47.728

6.  Intermolecular forces and energies between ligands and receptors.

Authors:  V T Moy; E L Florin; H E Gaub
Journal:  Science       Date:  1994-10-14       Impact factor: 47.728

7.  Adhesion forces between individual ligand-receptor pairs.

Authors:  E L Florin; V T Moy; H E Gaub
Journal:  Science       Date:  1994-04-15       Impact factor: 47.728

8.  Direct measurement of the forces between complementary strands of DNA.

Authors:  G U Lee; L A Chrisey; R J Colton
Journal:  Science       Date:  1994-11-04       Impact factor: 47.728

9.  Slow relaxational processes in the melting of linear biopolymers: a theory and its application to nucleic acids.

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Journal:  Biopolymers       Date:  1984-01       Impact factor: 2.505

10.  Strength of a weak bond connecting flexible polymer chains.

Authors:  E Evans; K Ritchie
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

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  32 in total

1.  Protein-protein ratchets: stochastic simulation and application to processive enzymes.

Authors:  C J Brokaw
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

Review 2.  Mechanics and imaging of single DNA molecules.

Authors:  M Hegner; W Grange
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

3.  Force spectroscopy with a small dithering of AFM tip: a method of direct and continuous measurement of the spring constant of single molecules and molecular complexes.

Authors:  Lilia A Chtcheglova; George T Shubeita; Sergey K Sekatskii; Giovanni Dietler
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

4.  Equilibrium and transition between single- and double-headed binding of kinesin as revealed by single-molecule mechanics.

Authors:  Kenji Kawaguchi; Sotaro Uemura; Shin'ichi Ishiwata
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

5.  Multi-bead-and-spring model to interpret protein detachment studied by AFM force spectroscopy.

Authors:  Csilla Gergely; Joseph Hemmerlé; Pierre Schaaf; J K Heinrich Hörber; Jean-Claude Voegel; Bernard Senger
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

6.  Effects of intermediate bound states in dynamic force spectroscopy.

Authors:  Imre Derényi; Denis Bartolo; Armand Ajdari
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

7.  Enforced detachment of red blood cells adhering to surfaces: statics and dynamics.

Authors:  Sébastien Pierrat; Françoise Brochard-Wyart; Pierre Nassoy
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

8.  Stochastic sensing of proteins with receptor-modified solid-state nanopores.

Authors:  Ruoshan Wei; Volker Gatterdam; Ralph Wieneke; Robert Tampé; Ulrich Rant
Journal:  Nat Nanotechnol       Date:  2012-03-11       Impact factor: 39.213

9.  Force-induced lysozyme--HyHEL5 antibody dissociation and its analysis by means of a cooperative binding model.

Authors:  Stefan Katletz; Cordula Stroh; Christian Rankl; Urbaan M Titulaer; Peter Hinterdorfer
Journal:  Biophys J       Date:  2010-07-06       Impact factor: 4.033

10.  The biomechanical properties of E. coli pili for urinary tract attachment reflect the host environment.

Authors:  Magnus Andersson; Bernt Eric Uhlin; Erik Fällman
Journal:  Biophys J       Date:  2007-08-03       Impact factor: 4.033

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