Literature DB >> 10962034

NMR reveals hydrogen bonds between oxygen and distal histidines in oxyhemoglobin.

J A Lukin1, V Simplaceanu, M Zou, N T Ho, C Ho.   

Abstract

Compared with free heme, the proteins hemoglobin (Hb) and myoglobin (Mb) exhibit greatly enhanced affinity for oxygen relative to carbon monoxide. This physiologically vital property has been attributed to either steric hindrance of CO or stabilization of O(2) binding by a hydrogen bond with the distal histidine. We report here the first direct evidence of such a hydrogen bond in both alpha- and beta-chains of oxyhemoglobin, as revealed by heteronuclear NMR spectra of chain-selectively labeled samples. Using these spectra, we have assigned the imidazole ring (1)H and (15)N chemical shifts of the proximal and distal histidines in both carbonmonoxy- and oxy-Hb. Because of their proximity to the heme, these chemical shifts are extremely sensitive to the heme pocket conformation. Comparison of the measured chemical shifts with values predicted from x-ray structures suggests differences between the solution and crystal structures of oxy-Hb. The chemical shift discrepancies could be accounted for by very small displacements of the proximal and distal histidines. This suggests that NMR could be used to obtain very high-resolution heme pocket structures of Hb, Mb, and other heme proteins.

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Year:  2000        PMID: 10962034      PMCID: PMC27028          DOI: 10.1073/pnas.190254697

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  What is the true structure of liganded haemoglobin?

Authors:  J R Tame
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Authors:  G S Kachalova; A N Popov; H D Bartunik
Journal:  Science       Date:  1999-04-16       Impact factor: 47.728

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Authors:  V Simplaceanu; J A Lukin; T Y Fang; M Zou; N T Ho; C Ho
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4.  The relationship between amide proton chemical shifts and secondary structure in proteins.

Authors:  T Asakura; K Taoka; M Demura; M P Williamson
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5.  Effects of ligands and organic phosphates on functional properties of human adult hemoglobin.

Authors:  M E Johnson; C Ho
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6.  Neutron diffraction reveals oxygen-histidine hydrogen bond in oxymyoglobin.

Authors:  S E Phillips; B P Schoenborn
Journal:  Nature       Date:  1981-07-02       Impact factor: 49.962

7.  Neutron diffraction study of carbonmonoxymyoglobin.

Authors:  X D Cheng; B P Schoenborn
Journal:  J Mol Biol       Date:  1991-07-20       Impact factor: 5.469

8.  A third quaternary structure of human hemoglobin A at 1.7-A resolution.

Authors:  M M Silva; P H Rogers; A Arnone
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Authors:  J G Pelton; D A Torchia; N D Meadow; S Roseman
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  18 in total

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9.  CO, NO and O2 as Vibrational Probes of Heme Protein Interactions.

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