Literature DB >> 10944581

Changing genetic information through RNA editing.

S Maas1, A Rich.   

Abstract

RNA editing, the post-transcriptional alteration of a gene-encoded sequence, is a widespread phenomenon in eukaryotes. As a consequence of RNA editing, functionally distinct proteins can be produced from a single gene. The molecular mechanisms involved include single or multiple base insertions or deletions as well as base substitutions. In mammals, one type of substitutional RNA editing, characterized by site-specific base-modification, was shown to modulate important physiological processes. The underlying reaction mechanism of substitutional RNA editing involves hydrolytic deamination of cytosine or adenosine bases to uracil or inosine, respectively. Protein factors have been characterized that are able to induce RNA editing in vitro. A supergene family of RNA-dependent deaminases has emerged with the recent addition of adenosine deaminases specific for tRNA. Here we review the developments that have substantially increased our understanding of base-modification RNA editing over the past few years, with an emphasis on mechanistic differences, evolutionary aspects and the first insights into the regulation of editing activity.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Year:  2000        PMID: 10944581     DOI: 10.1002/1521-1878(200009)22:9<790::AID-BIES4>3.0.CO;2-0

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  33 in total

Review 1.  Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs.

Authors:  T Kiss
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

Review 2.  The challenge of target sequence specificity in C-->U RNA editing.

Authors:  Nicholas O Davidson
Journal:  J Clin Invest       Date:  2002-02       Impact factor: 14.808

3.  Coordination of editing and splicing of glutamate receptor pre-mRNA.

Authors:  Eva Bratt; Marie Ohman
Journal:  RNA       Date:  2003-03       Impact factor: 4.942

4.  Nonrandom variations in human cancer ESTs indicate that mRNA heterogeneity increases during carcinogenesis.

Authors:  Marie Brulliard; Dalia Lorphelin; Olivier Collignon; Walter Lorphelin; Benoit Thouvenot; Emmanuel Gothié; Sandrine Jacquenet; Virginie Ogier; Olivier Roitel; Jean-Marie Monnez; Pierre Vallois; Frances T Yen; Olivier Poch; Marc Guenneugues; Gilles Karcher; Pierre Oudet; Bernard E Bihain
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-23       Impact factor: 11.205

5.  Evolutionary patterns of non-coding RNAs.

Authors:  Athanasius F Bompfünewerer; Christoph Flamm; Claudia Fried; Guido Fritzsch; Ivo L Hofacker; Jörg Lehmann; Kristin Missal; Axel Mosig; Bettina Müller; Sonja J Prohaska; Bärbel M R Stadler; Peter F Stadler; Andrea Tanzer; Stefan Washietl; Christina Witwer
Journal:  Theory Biosci       Date:  2005-04       Impact factor: 1.919

6.  Relatively small increases in the steady-state levels of nucleobase deamination products in DNA from human TK6 cells exposed to toxic levels of nitric oxide.

Authors:  Min Dong; Peter C Dedon
Journal:  Chem Res Toxicol       Date:  2006-01       Impact factor: 3.739

7.  Underediting of glutamate receptor GluR-B mRNA in malignant gliomas.

Authors:  S Maas; S Patt; M Schrey; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

8.  The Genomic Landscape and Clinical Relevance of A-to-I RNA Editing in Human Cancers.

Authors:  Leng Han; Lixia Diao; Shuangxing Yu; Xiaoyan Xu; Jie Li; Rui Zhang; Yang Yang; Henrica M J Werner; A Karina Eterovic; Yuan Yuan; Jun Li; Nikitha Nair; Rosalba Minelli; Yiu Huen Tsang; Lydia W T Cheung; Kang Jin Jeong; Jason Roszik; Zhenlin Ju; Scott E Woodman; Yiling Lu; Kenneth L Scott; Jin Billy Li; Gordon B Mills; Han Liang
Journal:  Cancer Cell       Date:  2015-10-01       Impact factor: 31.743

9.  Pervasive RNA editing among hornwort rbcL transcripts except Leiosporoceros.

Authors:  R Joel Duff; Francisco B-G Moore
Journal:  J Mol Evol       Date:  2005-09-22       Impact factor: 2.395

Review 10.  Effects of length and location on the cellular response to double-stranded RNA.

Authors:  Qiaoqiao Wang; Gordon G Carmichael
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

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