Literature DB >> 10943570

Chemically modified nucleic acid aptamers for in vitro selections: evolving evolution.

W Kusser1.   

Abstract

Combinatorial library selections through the systematic evolution of ligands by exponential enrichment (SELEX) technique identify so-called nucleic acid aptamers that bind with high-affinity and specificity to a wide range of selected molecules. However, the modest chemical functionality of nucleic acids poses some limits on their versatility as binders and catalysts, and, furthermore, the sensitivity of pure RNA- and DNA-based aptamers to nucleases restricts their use as therapeutic and diagnostic agents. Here we review synthetic chemistries for modifying nucleotides that have been developed to enhance the affinity of aptamers for targets and to increase their stability in biological fluids. Implementation of in vitro selections with modified nucleotides promises to be an elegant technique for the creation of ligands with novel physical and chemical properties and is anticipated to have a significant impact on biotechnology, diagnostics and drug development. The current molecular designs and applications of modified nucleotides for in vitro selections are reviewed, along with a discussion of future developments expected to further the utility of this approach in both practical and theoretical terms.

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Year:  2000        PMID: 10943570     DOI: 10.1016/s1389-0352(99)00002-1

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  21 in total

Review 1.  Recent developments in protein and cell-targeted aptamer selection and applications.

Authors:  Jun Liu; Mingxu You; Ying Pu; Huixia Liu; Mao Ye; Weihong Tan
Journal:  Curr Med Chem       Date:  2011       Impact factor: 4.530

Review 2.  The Toolbox for Modified Aptamers.

Authors:  Sergey A Lapa; Alexander V Chudinov; Edward N Timofeev
Journal:  Mol Biotechnol       Date:  2016-02       Impact factor: 2.695

3.  Circular Bivalent Aptamers Enable in Vivo Stability and Recognition.

Authors:  Hailan Kuai; Zilong Zhao; Liuting Mo; Hui Liu; Xiaoxiao Hu; Ting Fu; Xiaobing Zhang; Weihong Tan
Journal:  J Am Chem Soc       Date:  2017-06-29       Impact factor: 15.419

Review 4.  Aptamers: multifunctional molecules for biomedical research.

Authors:  Jayeeta Banerjee; Marit Nilsen-Hamilton
Journal:  J Mol Med (Berl)       Date:  2013-09-18       Impact factor: 4.599

5.  Systematic optimization and modification of a DNA aptamer with 2'-O-methyl RNA analogues.

Authors:  George Maio; Osita Enweronye; Hasan E Zumrut; Sana Batool; Nabeela Van; Prabodhika Mallikaratchy
Journal:  ChemistrySelect       Date:  2017-03-06       Impact factor: 2.109

Review 6.  Cell-surface sensors: lighting the cellular environment.

Authors:  Md Monsur Ali; Dong-Ku Kang; Kyle Tsang; Moyu Fu; Jeffrey M Karp; Weian Zhao
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2012-07-03

Review 7.  Aptamers as molecular recognition elements for electrical nanobiosensors.

Authors:  Jeong-O Lee; Hye-Mi So; Eun-Kyoung Jeon; Hyunju Chang; Keehoon Won; Yong Hwan Kim
Journal:  Anal Bioanal Chem       Date:  2007-10-23       Impact factor: 4.142

8.  Using an RNA aptamer probe for flow cytometry detection of CD30-expressing lymphoma cells.

Authors:  Peng Zhang; Nianxi Zhao; Zihua Zeng; Yongdong Feng; Ching-Hsuan Tung; Chung-Che Chang; Youli Zu
Journal:  Lab Invest       Date:  2009-10-12       Impact factor: 5.662

9.  In vitro selection of RNA aptamers against a conserved region of the Plasmodium falciparum erythrocyte membrane protein 1.

Authors:  Anders Barfod; Tina Persson; Johan Lindh
Journal:  Parasitol Res       Date:  2009-08-20       Impact factor: 2.289

10.  Conformationally rigid nucleoside probes help understand the role of sugar pucker and nucleobase orientation in the thrombin-binding aptamer.

Authors:  Hisao Saneyoshi; Stefania Mazzini; Anna Aviñó; Guillem Portella; Carlos González; Modesto Orozco; Víctor E Marquez; Ramon Eritja
Journal:  Nucleic Acids Res       Date:  2009-07-20       Impact factor: 16.971

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