Literature DB >> 10932175

Hot-stop PCR: a simple and general assay for linear quantitation of allele ratios.

H Uejima1, M P Lee, H Cui, A P Feinberg.   

Abstract

We have developed a simple, quantitative assay for measurement of allele ratios that circumvents the problem of heteroduplex formation skewing the results of restriction endonuclease digestion of PCR products. This assay, 'hot-stop PCR', involves addition of a radiolabelled PCR primer at the final cycle. We applied the assay to analysis of loss of imprinting (LOI) of the insulin-like growth factor II gene (IGF2) in tumours.

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Year:  2000        PMID: 10932175     DOI: 10.1038/78040

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  38 in total

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Journal:  Genetics       Date:  2003-01       Impact factor: 4.562

2.  A longitudinal study of X-inactivation ratio in human females.

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Journal:  Hum Genet       Date:  2004-08-28       Impact factor: 4.132

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Authors:  Haruko Takeda; Carole Charlier; Frédéric Farnir; Michel Georges
Journal:  RNA       Date:  2010-08-02       Impact factor: 4.942

4.  Human dopamine transporter gene: differential regulation of 18-kb haplotypes.

Authors:  Ying Zhao; Nian Xiong; Yang Liu; Yanhong Zhou; Nuomin Li; Hong Qing; Zhicheng Lin
Journal:  Pharmacogenomics       Date:  2013-09       Impact factor: 2.533

5.  BEGAIN: a novel imprinted gene that generates paternally expressed transcripts in a tissue- and promoter-specific manner in sheep.

Authors:  Maria A Smit; Xavier Tordoir; Gabor Gyapay; Noelle E Cockett; Michel Georges; Carole Charlier
Journal:  Mamm Genome       Date:  2005-10-29       Impact factor: 2.957

6.  Two distinct mechanisms of silencing by the KvDMR1 imprinting control region.

Authors:  Jong-Yeon Shin; Galina V Fitzpatrick; Michael J Higgins
Journal:  EMBO J       Date:  2007-12-13       Impact factor: 11.598

7.  Nonsense mutations in hERG cause a decrease in mutant mRNA transcripts by nonsense-mediated mRNA decay in human long-QT syndrome.

Authors:  Qiuming Gong; Li Zhang; G Michael Vincent; Benjamin D Horne; Zhengfeng Zhou
Journal:  Circulation       Date:  2007-06-18       Impact factor: 29.690

8.  Detection of allelic imbalance in the gene expression of hMSH2 or RB1 in lymphocytes from pedigrees of hereditary, nonpolyposis, colorectal cancer and retinoblastoma by an RNA difference plot.

Authors:  Yoshinori Murakami; Kana Isogai; Hiroyuki Tomita; Mika Sakurai-Yageta; Tomoko Maruyama; Akio Hidaka; Kiyoshi Nose; Kokichi Sugano; Akihiro Kaneko
Journal:  J Hum Genet       Date:  2004-10-08       Impact factor: 3.172

9.  Identification of a large novel imprinted gene cluster on mouse proximal chromosome 6.

Authors:  Ryuichi Ono; Hirosuke Shiura; Hiroyuki Aburatani; Takashi Kohda; Tomoko Kaneko-Ishino; Fumitoshi Ishino
Journal:  Genome Res       Date:  2003-07       Impact factor: 9.043

10.  Determining the one, two, three, or four long and short loci of human complement C4 in a major histocompatibility complex haplotype encoding C4A or C4B proteins.

Authors:  Erwin K Chung; Yan Yang; Kristi L Rupert; Karla N Jones; Robert M Rennebohm; Carol A Blanchong; C Yung Yu
Journal:  Am J Hum Genet       Date:  2002-09-10       Impact factor: 11.025

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