Literature DB >> 1093137

On the statistical significance of primary structural features found in DNA-protein interaction sites.

G Dykes, R Bambara, K Marians, R Wu.   

Abstract

Probabilities of occurrence for a number of the symmetries and other sequence regularities found in DNA-protein interaction site sequences have been calculated for segments of random DNA sequence. Results show that many of the symmetrical and repetitive features seen in these interaction sites are likely to have occured by chance. Other features are so unlikely to have occurred by chance that they are probably involved in the DNA-protein interaction processes.

Mesh:

Substances:

Year:  1975        PMID: 1093137      PMCID: PMC342839          DOI: 10.1093/nar/2.3.327

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

1.  The nucleotide sequence preceding an RNA polymerase initiation site on SV40 DNA. Part 1. The sequence of the late strand transcript.

Authors:  B S Zain; S M Weissman; R Dhar; J Pan
Journal:  Nucleic Acids Res       Date:  1974-04       Impact factor: 16.971

2.  Genetic regulatory mechanisms in the synthesis of proteins.

Authors:  F JACOB; J MONOD
Journal:  J Mol Biol       Date:  1961-06       Impact factor: 5.469

3.  ISOLATION OF THE lambda PHAGE REPRESSOR.

Authors:  M Ptashne
Journal:  Proc Natl Acad Sci U S A       Date:  1967-02       Impact factor: 11.205

4.  Isolation of the lac repressor.

Authors:  W Gilbert; B Müller-Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1966-12       Impact factor: 11.205

5.  Molecular mechanism for genetic recombination.

Authors:  H M Sobell
Journal:  Proc Natl Acad Sci U S A       Date:  1972-09       Impact factor: 11.205

Review 6.  Mechanism of action and structure of acid deoxyribonuclease.

Authors:  G Bernardi
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1968

7.  Nucleotide sequence of a ribonucleic acid transcribed in vitro from lambda phage deoxyribonucleic acid.

Authors:  P Lebowitz; S M Weissman; C M Radding
Journal:  J Biol Chem       Date:  1971-08-25       Impact factor: 5.157

8.  Physicochemical studies on polydeoxyribonucleotides containing defined repeating nucleotide sequences.

Authors:  R D Wells; J E Larson; R C Grant; B E Shortle; C R Cantor
Journal:  J Mol Biol       Date:  1970-12-28       Impact factor: 5.469

9.  General model for the chromosomes of higher organisms.

Authors:  F Crick
Journal:  Nature       Date:  1971-11-05       Impact factor: 49.962

10.  Specific binding of the lambda phage repressor to lambda DNA.

Authors:  M Ptashne
Journal:  Nature       Date:  1967-04-15       Impact factor: 49.962

View more
  10 in total

1.  Structure and evolution of a family of interspersed repetitive DNA sequences in Caenorhabditis elegans.

Authors:  K M Felsenstein; S W Emmons
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

2.  Minimal length of the lactose operator sequence for the specific recognition by the lactose repressor.

Authors:  C P Bahl; R Wu; J Stawinsky; S A Narang
Journal:  Proc Natl Acad Sci U S A       Date:  1977-03       Impact factor: 11.205

3.  Site-specific initiation of a DNA fragment: nucleotide sequence of the bacteriophage G4 negative-strand initiation site.

Authors:  J Sims; D Dressler
Journal:  Proc Natl Acad Sci U S A       Date:  1978-07       Impact factor: 11.205

Review 4.  Head morphogenesis of complex double-stranded deoxyribonucleic acid bacteriophages.

Authors:  H Murialdo; A Becker
Journal:  Microbiol Rev       Date:  1978-09

5.  A computer aided oligonucleotide analysis provides a model sequence for RNA polymerase-promoter recognition in E.coli.

Authors:  G E Scherer; M D Walkinshaw; S Arnott
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

6.  Sequences closely related to an immunoglobulin gene promoter/enhancer element occur also upstream of other eukaryotic and of prokaryotic genes.

Authors:  F G Falkner; R Mocikat; H G Zachau
Journal:  Nucleic Acids Res       Date:  1986-11-25       Impact factor: 16.971

7.  Primary structure of the soybean nodulin-23 gene and potential regulatory elements in the 5'-flanking regions of nodulin and leghemoglobin genes.

Authors:  V P Mauro; T Nguyen; P Katinakis; D P Verma
Journal:  Nucleic Acids Res       Date:  1985-01-11       Impact factor: 16.971

8.  Nucleotide sequence of region preceding trp mRNA initiation site and its role in promoter and operator function.

Authors:  G N Bennett; M E Schweingruber; K D Brown; C Squires; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  1976-07       Impact factor: 11.205

9.  Organization and evolution of the mitochondrial genome of yeast.

Authors:  G Bernardi
Journal:  J Mol Evol       Date:  1976-12-31       Impact factor: 2.395

10.  Sequences of the recA gene and protein.

Authors:  A Sancar; C Stachelek; W Konigsberg; W D Rupp
Journal:  Proc Natl Acad Sci U S A       Date:  1980-05       Impact factor: 11.205

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.