Literature DB >> 10919780

Distribution and diversity of archaea corresponding to the limnological cycle of a hypersaline stratified lake (Solar lake, Sinai, Egypt).

E Cytryn1, D Minz, R S Oremland, Y Cohen.   

Abstract

The vertical and seasonal distribution and diversity of archaeal sequences was investigated in a hypersaline, stratified, monomictic lake, Solar Lake, Sinai, Egypt, during the limnological development of stratification and mixing. Archaeal sequences were studied via phylogenetic analysis of 16S rDNA sequences as well as denaturing gradient gel electrophoresis analysis. The 165 clones studied were grouped into four phylogenetically different clusters. Most of the clones isolated from both the aerobic epilimnion and the sulfide-rich hypolimnion were defined as cluster I, belonging to the Halobacteriaceae family. The three additional clusters were all isolated from the anaerobic hypolimnion. Cluster II is phylogenetically located between the genera Methanobacterium and Methanococcus. Clusters III and IV relate to two previously documented groups of uncultured euryarchaeota, remotely related to the genus Thermoplasma. No crenarchaeota were found in the water column of the Solar Lake. The archaeal community in the Solar Lake under both stratified and mixed conditions was dominated by halobacteria in salinities higher than 10%. During stratification, additional clusters, some of which may possibly relate to uncultured halophilic methanogens, were found in the sulfide- and methane-rich hypolimnion.

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Year:  2000        PMID: 10919780      PMCID: PMC92144          DOI: 10.1128/AEM.66.8.3269-3276.2000

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  23 in total

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2.  Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes.

Authors:  D Minz; J L Flax; S J Green; G Muyzer; Y Cohen; M Wagner; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

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Authors:  E F DeLong
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Authors:  M Kamekura
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5.  Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh.

Authors:  M A Munson; D B Nedwell; T M Embley
Journal:  Appl Environ Microbiol       Date:  1997-12       Impact factor: 4.792

6.  Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel.

Authors:  R Massana; A E Murray; C M Preston; E F DeLong
Journal:  Appl Environ Microbiol       Date:  1997-01       Impact factor: 4.792

7.  Molecular phylogeny of Archaea from soil.

Authors:  S B Bintrim; T J Donohue; J Handelsman; G P Roberts; R M Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-07       Impact factor: 11.205

8.  Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA.

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Journal:  Appl Environ Microbiol       Date:  1997-09       Impact factor: 4.792

9.  Methane-consuming archaebacteria in marine sediments.

Authors:  K U Hinrichs; J M Hayes; S P Sylva; P G Brewer; E F DeLong
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10.  Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval.

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Journal:  Appl Environ Microbiol       Date:  1998-03       Impact factor: 4.792

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  31 in total

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Authors:  Julie A Huber; David A Butterfield; John A Baross
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

2.  Dominant microbial composition and its vertical distribution in saline meromictic Lake Kaiike (Japan) as revealed by quantitative oligonucleotide probe membrane hybridization.

Authors:  Yoshikazu Koizumi; Hisaya Kojima; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

3.  Microbial diversity in water and sediment of Lake Chaka, an athalassohaline lake in northwestern China.

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Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

4.  Development of temporal temperature gradient electrophoresis for characterising methanogen diversity.

Authors:  Julie Earl; Roger W Pickup; Donald A Ritchie; Clive Edwards
Journal:  Microb Ecol       Date:  2005-11-24       Impact factor: 4.552

5.  Population dynamics within a microbial consortium during growth on diesel fuel in saline environments.

Authors:  Sabine Kleinsteuber; Volker Riis; Ingo Fetzer; Hauke Harms; Susann Müller
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

6.  Selective phylogenetic analysis targeting 16S rRNA genes of hyperthermophilic archaea in the deep-subsurface hot biosphere.

Authors:  Hiroyuki Kimura; Jun-Ichiro Ishibashi; Harue Masuda; Kenji Kato; Satoshi Hanada
Journal:  Appl Environ Microbiol       Date:  2007-02-02       Impact factor: 4.792

7.  Production of biosurfactant on crude date syrup under saline conditions by entrapped cells of Natrialba sp. strain E21, an extremely halophilic bacterium isolated from a solar saltern (Ain Salah, Algeria).

Authors:  Salima Kebbouche-Gana; Mohamed Lamine Gana; Imen Ferrioune; Souad Khemili; Nesrine Lenchi; Sihem Akmouci-Toumi; Nabila Amel Bouanane-Darenfed; Nacer-Eddine Djelali
Journal:  Extremophiles       Date:  2013-09-24       Impact factor: 2.395

8.  Comparative molecular analysis of endoevaporitic microbial communities.

Authors:  Jason W Sahl; Norman R Pace; John R Spear
Journal:  Appl Environ Microbiol       Date:  2008-08-29       Impact factor: 4.792

9.  Archaeal diversity in the haloalkaline Lake Elmenteita in Kenya.

Authors:  Romano Mwirichia; Sylvie Cousin; Anne W Muigai; Hamadi I Boga; Erko Stackebrandt
Journal:  Curr Microbiol       Date:  2009-10-06       Impact factor: 2.188

10.  Bacterioplankton community structure in a maritime antarctic oligotrophic lake during a period of holomixis, as determined by denaturing gradient gel electrophoresis (DGGE) and fluorescence in situ hybridization (FISH).

Authors:  D A Pearce
Journal:  Microb Ecol       Date:  2003-05-13       Impact factor: 4.552

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