Literature DB >> 10896319

Use of electron-electron repulsion energy as a molecular descriptor in QSAR and QSPR studies.

X Gironés1, L Amat, D Robert, R Carbó-Dorca.   

Abstract

Electron-electron repulsion energy (<Vee>) is presented as a new molecular descriptor to be employed in QSAR and QSPR studies. Here it is shown that this electronic energy parameter is connected to molecular quantum similarity measures (MQSM), and as a consequence can be considered as a complement to steric and electronic parameters in description of molecular properties and biological responses of organic compounds. The present strategy considers the molecule as a whole, thus there is no need to employ contributions of isolated fragments as in many calculations of molecular descriptors, like log P or the Free-Wilson analysis. The procedure has been tested in a widespread set of molecules: alcohols, alkanamides, indole derivatives and 1-alkylimidazoles. Molecular properties, as well as toxicity, are correlated using <Vee> as a parameter, and extensions to the method are given for handling difficult systems. In almost all studied cases, satisfactory linear relationships were finally obtained.

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Mesh:

Year:  2000        PMID: 10896319     DOI: 10.1023/a:1008136520396

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  16 in total

1.  Simple linear QSAR models based on quantum similarity measures.

Authors:  L Amat; R Carbó-Dorca; R Ponec
Journal:  J Med Chem       Date:  1999-12-16       Impact factor: 7.446

2.  Molecular basis of quantitative structure-properties relationships (QSPR): a quantum similarity approach.

Authors:  R Ponec; L Amat; R Carbó-Dorca
Journal:  J Comput Aided Mol Des       Date:  1999-05       Impact factor: 3.686

3.  Quantum-Chemical Descriptors in QSAR/QSPR Studies.

Authors:  Mati Karelson; Victor S. Lobanov; Alan R. Katritzky
Journal:  Chem Rev       Date:  1996-05-09       Impact factor: 60.622

4.  A MATHEMATICAL CONTRIBUTION TO STRUCTURE-ACTIVITY STUDIES.

Authors:  S M FREE; J W WILSON
Journal:  J Med Chem       Date:  1964-07       Impact factor: 7.446

Review 5.  Toward a quantitative comparative toxicology of organic compounds.

Authors:  C Hansch; D Kim; A J Leo; E Novellino; C Silipo; A Vittoria
Journal:  Crit Rev Toxicol       Date:  1989       Impact factor: 5.635

6.  Structural basis of carcinogenicity in rodents of genotoxicants and non-genotoxicants.

Authors:  H S Rosenkranz; G Klopman
Journal:  Mutat Res       Date:  1990-02       Impact factor: 2.433

7.  Molecular quantum similarity measures tuned 3D QSAR: an antitumoral family validation study.

Authors:  L Amat; D Robert; E Besalú; R Carbó-Dorca
Journal:  J Chem Inf Comput Sci       Date:  1998 Jul-Aug

8.  MS-WHIM, new 3D theoretical descriptors derived from molecular surface properties: a comparative 3D QSAR study in a series of steroids.

Authors:  G Bravi; E Gancia; P Mascagni; M Pegna; R Todeschini; A Zaliani
Journal:  J Comput Aided Mol Des       Date:  1997-01       Impact factor: 3.686

9.  Structure-activity relationships in the effects of 1-alkylimidazoles on microsomal oxidation in vitro and in vivo.

Authors:  C F Wilkinson; K Hetnarski; G P Cantwell; F J Di Carlo
Journal:  Biochem Pharmacol       Date:  1974-09-01       Impact factor: 5.858

10.  On model building in structure-activity relationships. A reexamination of adrenergic blocking activity of beta-halo-beta-arylalkylamines.

Authors:  S H Unger; C Hansch
Journal:  J Med Chem       Date:  1973-07       Impact factor: 7.446

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  4 in total

1.  Antimalarial activity of synthetic 1,2,4-trioxanes and cyclic peroxy ketals, a quantum similarity study.

Authors:  X Gironés; A Gallegos; R Carbó-Dorca
Journal:  J Comput Aided Mol Des       Date:  2001-12       Impact factor: 3.686

2.  Genetic neural network modeling of the selective inhibition of the intermediate-conductance Ca2+ -activated K+ channel by some triarylmethanes using topological charge indexes descriptors.

Authors:  Julio Caballero; Miguel Garriga; Michael Fernández
Journal:  J Comput Aided Mol Des       Date:  2005-12-23       Impact factor: 3.686

3.  An efficient and accurate molecular alignment and docking technique using ab initio quality scoring.

Authors:  László Füsti-Molnár; Kenneth M Merz
Journal:  J Chem Phys       Date:  2008-07-14       Impact factor: 3.488

4.  Structure-toxicity relationships of polycyclic aromatic hydrocarbons using molecular quantum similarity.

Authors:  A Gallegos; D Robert; X Gironés; R Carbó-Dorca
Journal:  J Comput Aided Mol Des       Date:  2001-01       Impact factor: 3.686

  4 in total

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