Literature DB >> 10216833

Molecular basis of quantitative structure-properties relationships (QSPR): a quantum similarity approach.

R Ponec1, L Amat, R Carbó-Dorca.   

Abstract

Since the dawn of quantitative structure-properties relationships (QSPR), empirical parameters related to structural, electronic and hydrophobic molecular properties have been used as molecular descriptors to determine such relationships. Among all these parameters, Hammett sigma constants and the logarithm of the octanol-water partition coefficient, log P, have been massively employed in QSPR studies. In the present paper, a new molecular descriptor, based on quantum similarity measures (QSM), is proposed as a general substitute of these empirical parameters. This work continues previous analyses related to the use of QSM to QSPR, introducing molecular quantum self-similarity measures (MQS-SM) as a single working parameter in some cases. The use of MQS-SM as a molecular descriptor is first confirmed from the correlation with the aforementioned empirical parameters. The Hammett equation has been examined using MQS-SM for a series of substituted carboxylic acids. Then, for a series of aliphatic alcohols and acetic acid esters, log P values have been correlated with the self-similarity measure between density functions in water and octanol of a given molecule. And finally, some examples and applications of MQS-SM to determine QSAR are presented. In all studied cases MQS-SM appeared to be excellent molecular descriptors usable in general QSPR applications of chemical interest.

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Year:  1999        PMID: 10216833     DOI: 10.1023/a:1008059505361

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  2 in total

Review 1.  A novel approach to molecular similarity.

Authors:  D L Cooper; N L Allan
Journal:  J Comput Aided Mol Des       Date:  1989-09       Impact factor: 3.686

2.  Structure-activity relationships from molecular similarity matrices.

Authors:  A C Good; S S So; W G Richards
Journal:  J Med Chem       Date:  1993-02-19       Impact factor: 7.446

  2 in total
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1.  Use of electron-electron repulsion energy as a molecular descriptor in QSAR and QSPR studies.

Authors:  X Gironés; L Amat; D Robert; R Carbó-Dorca
Journal:  J Comput Aided Mol Des       Date:  2000-07       Impact factor: 3.686

2.  Structure-toxicity relationships of polycyclic aromatic hydrocarbons using molecular quantum similarity.

Authors:  A Gallegos; D Robert; X Gironés; R Carbó-Dorca
Journal:  J Comput Aided Mol Des       Date:  2001-01       Impact factor: 3.686

3.  Defining binding efficiency and specificity of auxins for SCF(TIR1/AFB)-Aux/IAA co-receptor complex formation.

Authors:  Sarah Lee; Shanthy Sundaram; Lynne Armitage; John P Evans; Tim Hawkes; Stefan Kepinski; Noel Ferro; Richard M Napier
Journal:  ACS Chem Biol       Date:  2013-12-23       Impact factor: 5.100

4.  Net present value approaches for drug discovery.

Authors:  Andreas M Svennebring; Jarl Es Wikberg
Journal:  Springerplus       Date:  2013-04-01
  4 in total

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