Literature DB >> 10893520

Statistical artifacts in diffusion tensor MRI (DT-MRI) caused by background noise.

P J Basser1, S Pajevic.   

Abstract

This work helps elucidate how background noise introduces statistical artifacts in the distribution of the sorted eigenvalues and eigenvectors in diffusion tensor MRI (DT-MRI) data. Although it was known that sorting eigenvalues (principal diffusivities) by magnitude introduces a bias in their sample mean within a homogeneous region of interest (ROI), here it is shown that magnitude sorting also introduces a significant bias in the variance of the sample mean eigenvalues. New methods are presented to calculate the mean and variance of the eigenvectors of the diffusion tensor, based on a dyadic tensor representation of eigenvalue-eigenvector pairs. Based on their use it is shown that sorting eigenvalues by magnitude also introduces a bias in the mean and the variance of the sample eigenvectors (principal directions). This required the development of new methods to calculate the mean and variance of the eigenvectors of the diffusion tensor, based on a dyadic tensor representation of eigenvalue-eigenvector pairs. Moreover, a new approach is proposed to order these pairs within an ROI. To do this, a correspondence between each principal axis of the diffusion ellipsoid, an eigenvalue-eigenvector pair, and a dyadic tensor constructed from it is exploited. A measure of overlap between principal axes of diffusion ellipsoids in different voxels is defined that employs projections between these dyadic tensors. The optimal eigenvalue assignment within an ROI maximizes this overlap. Bias in the estimate of the mean and of the variance of the eigenvalues and of their corresponding eigenvectors is reduced in DT-MRI experiments and in Monte Carlo simulations of such experiments. Improvement is most significant in isotropic regions, but some is also observed in anisotropic regions. This statistical framework should enhance our ability to characterize microstructure and architecture of healthy tissue, and help to assess its changes in development, disease, and degeneration. Mitigating these artifacts should also improve the characterization of diffusion anisotropy and the elucidation of fiber-tract trajectories in the brain and in other fibrous tissues. Magn Reson Med 44:41-50, 2000. Published 2000 Wiley-Liss, Inc.

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Year:  2000        PMID: 10893520     DOI: 10.1002/1522-2594(200007)44:1<41::aid-mrm8>3.0.co;2-o

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  86 in total

1.  Spatial normalization of diffusion tensor MRI using multiple channels.

Authors:  Hae-Jeong Park; Marek Kubicki; Martha E Shenton; Alexandre Guimond; Robert W McCarley; Stephan E Maier; Ron Kikinis; Ferenc A Jolesz; Carl-Fredrik Westin
Journal:  Neuroimage       Date:  2003-12       Impact factor: 6.556

2.  Sensitivity-encoded diffusion tensor MR imaging of the cervical cord.

Authors:  Mara Cercignani; Mark A Horsfield; Federica Agosta; Massimo Filippi
Journal:  AJNR Am J Neuroradiol       Date:  2003 Jun-Jul       Impact factor: 3.825

3.  Diffusion property differences of the lower leg musculature between athletes and non-athletes using 1.5T MRI.

Authors:  Yoshikazu Okamoto; Shintaro Mori; Yuka Kujiraoka; Katsuhiro Nasu; Yuji Hirano; Manabu Minami
Journal:  MAGMA       Date:  2011-11-16       Impact factor: 2.310

4.  Assessment of bias for MRI diffusion tensor imaging using SIMEX.

Authors:  Carolyn B Lauzon; Andrew J Asman; Ciprian Crainiceanu; Brian C Caffo; Bennett A Landman
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

5.  FLAIR diffusion-tensor MR tractography: comparison of fiber tracking with conventional imaging.

Authors:  Ming-Chung Chou; Yi-Ru Lin; Teng-Yi Huang; Chao-Ying Wang; Hsiao-Wen Chung; Chun-Jung Juan; Cheng-Yu Chen
Journal:  AJNR Am J Neuroradiol       Date:  2005-03       Impact factor: 3.825

6.  PROPELLER EPI: an MRI technique suitable for diffusion tensor imaging at high field strength with reduced geometric distortions.

Authors:  Fu-Nien Wang; Teng-Yi Huang; Fa-Hsuan Lin; Tzu-Chao Chuang; Nan-Kuei Chen; Hsiao-Wen Chung; Cheng-Yu Chen; Kenneth K Kwong
Journal:  Magn Reson Med       Date:  2005-11       Impact factor: 4.668

7.  Ex vivo 3D diffusion tensor imaging and quantification of cardiac laminar structure.

Authors:  Patrick A Helm; Hsiang-Jer Tseng; Laurent Younes; Elliot R McVeigh; Raimond L Winslow
Journal:  Magn Reson Med       Date:  2005-10       Impact factor: 4.668

8.  On the averaging of cardiac diffusion tensor MRI data: the effect of distance function selection.

Authors:  Archontis Giannakidis; Gerd Melkus; Guang Yang; Grant T Gullberg
Journal:  Phys Med Biol       Date:  2016-10-18       Impact factor: 3.609

9.  Denoising of diffusion MRI using random matrix theory.

Authors:  Jelle Veraart; Dmitry S Novikov; Daan Christiaens; Benjamin Ades-Aron; Jan Sijbers; Els Fieremans
Journal:  Neuroimage       Date:  2016-08-11       Impact factor: 6.556

10.  A note on the validity of statistical bootstrapping for estimating the uncertainty of tensor parameters in diffusion tensor images.

Authors:  Ying Yuan; Hongtu Zhu; Joseph G Ibrahim; Weili Lin; Bradley S Peterson
Journal:  IEEE Trans Med Imaging       Date:  2008-10       Impact factor: 10.048

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