Literature DB >> 10884409

Escherichia coli CspA-family RNA chaperones are transcription antiterminators.

W Bae1, B Xia, M Inouye, K Severinov.   

Abstract

CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone, which is thought to facilitate translation at low temperature by destabilizing mRNA structures. Here we demonstrate that CspA, as well as homologous RNA chaperones CspE and CspC, are transcription antiterminators. In vitro, the addition of physiological concentrations of recombinant CspA, CspE, or CspC decreased transcription termination at several intrinsic terminators and also decreased transcription pausing. In vivo, overexpression of cloned CspC and CspE at 37 degrees C was sufficient to induce transcription of the metY-rpsO operon genes nusA, infB, rbfA, and pnp located downstream of multiple transcription terminators. Similar induction of downstream metY-rpsO operon genes was observed at cold shock, a condition to which the cell responds by massive overproduction of CspA. The products of nusA, infB, rbfA, and pnp-NusA, IF2, RbfA, and PNP-are known to be induced at cold shock. We propose that the cold-shock induction of nusA, infB, rbfA, and pnp occurs through transcription antitermination, which is mediated by CspA and other cold shock-induced Csp proteins.

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Year:  2000        PMID: 10884409      PMCID: PMC16622          DOI: 10.1073/pnas.97.14.7784

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Sequence-selective interactions with RNA by CspB, CspC and CspE, members of the CspA family of Escherichia coli.

Authors:  S Phadtare; M Inouye
Journal:  Mol Microbiol       Date:  1999-09       Impact factor: 3.501

2.  Suppression of a cold-sensitive mutation in 16S rRNA by overexpression of a novel ribosome-binding factor, RbfA.

Authors:  C S Dammel; H F Noller
Journal:  Genes Dev       Date:  1995-03-01       Impact factor: 11.361

3.  Post-transcriptional regulation of CspA expression in Escherichia coli.

Authors:  A Brandi; P Pietroni; C O Gualerzi; C L Pon
Journal:  Mol Microbiol       Date:  1996-01       Impact factor: 3.501

4.  The role of the 5'-end untranslated region of the mRNA for CspA, the major cold-shock protein of Escherichia coli, in cold-shock adaptation.

Authors:  W Jiang; L Fang; M Inouye
Journal:  J Bacteriol       Date:  1996-08       Impact factor: 3.490

5.  CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone.

Authors:  W Jiang; Y Hou; M Inouye
Journal:  J Biol Chem       Date:  1997-01-03       Impact factor: 5.157

6.  Role of Escherichia coli RNA polymerase alpha subunit in modulation of pausing, termination and anti-termination by the transcription elongation factor NusA.

Authors:  K Liu; Y Zhang; K Severinov; A Das; M M Hanna
Journal:  EMBO J       Date:  1996-01-02       Impact factor: 11.598

Review 7.  The cold-shock response--a hot topic.

Authors:  P G Jones; M Inouye
Journal:  Mol Microbiol       Date:  1994-03       Impact factor: 3.501

8.  Rapid RNA polymerase genetics: one-day, no-column preparation of reconstituted recombinant Escherichia coli RNA polymerase.

Authors:  H Tang; K Severinov; A Goldfarb; R H Ebright
Journal:  Proc Natl Acad Sci U S A       Date:  1995-05-23       Impact factor: 11.205

9.  Differential stringent control of the tandem E. coli ribosomal RNA promoters from the rrnA operon expressed in vivo in multicopy plasmids.

Authors:  P Sarmientos; J E Sylvester; S Contente; M Cashel
Journal:  Cell       Date:  1983-04       Impact factor: 41.582

10.  Termination-altering amino acid substitutions in the beta' subunit of Escherichia coli RNA polymerase identify regions involved in RNA chain elongation.

Authors:  R Weilbaecher; C Hebron; G Feng; R Landick
Journal:  Genes Dev       Date:  1994-12-01       Impact factor: 11.361

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  133 in total

1.  Selective mRNA degradation by polynucleotide phosphorylase in cold shock adaptation in Escherichia coli.

Authors:  K Yamanaka; M Inouye
Journal:  J Bacteriol       Date:  2001-05       Impact factor: 3.490

2.  Non-templated addition of nucleotides to the 3' end of nascent RNA during RNA editing in Physarum.

Authors:  Y W Cheng; L M Visomirski-Robic; J M Gott
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

3.  Streptococcus pneumonia YlxR at 1.35 A shows a putative new fold.

Authors:  J Osipiuk; P Górnicki; L Maj; I Dementieva; R Laskowski; A Joachimiak
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-10-25

4.  CSDBase: an interactive database for cold shock domain-containing proteins and the bacterial cold shock response.

Authors:  Michael H W Weber; Ingo Fricke; Niclas Doll; Mohamed A Marahiel
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

5.  A family of RRM-type RNA-binding proteins specific to plant mitochondria.

Authors:  Matthieu Vermel; Benoit Guermann; Ludovic Delage; Jean-Michel Grienenberger; Laurence Maréchal-Drouard; José M Gualberto
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-23       Impact factor: 11.205

6.  Localization of cold shock proteins to cytosolic spaces surrounding nucleoids in Bacillus subtilis depends on active transcription.

Authors:  M H Weber; A V Volkov; I Fricke; M A Marahiel; P L Graumann
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

7.  Deep trefoil knot implicated in RNA binding found in an archaebacterial protein.

Authors:  Thomas I Zarembinski; Youngchang Kim; Kelly Peterson; Dinesh Christendat; Akil Dharamsi; Cheryl H Arrowsmith; Aled M Edwards; Andrzej Joachimiak
Journal:  Proteins       Date:  2003-02-01

8.  Improved adaptation to cold-shock, stationary-phase, and freezing stresses in Lactobacillus plantarum overproducing cold-shock proteins.

Authors:  Sylviane Derzelle; Bernard Hallet; Thierry Ferain; Jean Delcour; Pascal Hols
Journal:  Appl Environ Microbiol       Date:  2003-07       Impact factor: 4.792

9.  Cold shock induction of the cspL gene in Lactobacillus plantarum involves transcriptional regulation.

Authors:  Sylviane Derzelle; Bernard Hallet; Thierry Ferain; Jean Delcour; Pascal Hols
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

10.  Transcriptomic profiling of the oyster pathogen Vibrio splendidus opens a window on the evolutionary dynamics of the small RNA repertoire in the Vibrio genus.

Authors:  Claire Toffano-Nioche; An N Nguyen; Claire Kuchly; Alban Ott; Daniel Gautheret; Philippe Bouloc; Annick Jacq
Journal:  RNA       Date:  2012-10-24       Impact factor: 4.942

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