Literature DB >> 10872803

Dynamic measurement of single protein's mechanical properties.

K Mitsui1, K Nakajima, H Arakawa, M Hara, A Ikai.   

Abstract

Dimerized (tandemly repeated) protein was constructed, and the stretching force during the unfolding of the single protein molecule was measured using an atomic force microscope. In quasistatic measurements using normal force-distance curve measurements, each monomer unit was unfolded step by step. To elucidate the conformational state at each extension length, we measured the relax-stress response of the protein using short stroke sinusoidal movements of the sample stage. This allowed us to investigate the dynamic response of the protein repeatedly without full stretching or rupturing. Although the protein molecule responded in-phase to the applied movement in most cases, we found a novel out-of-phase response around the stretching length where the second monomer unit unfolded. Applying the spring constant measured in the quasistatic experiment, the out-of-phase response was reproduced in the simple calculation, which suggested the folding and the unfolding at the second monomer unit were taking place repeatedly during the relax-stress response measurement.

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Year:  2000        PMID: 10872803     DOI: 10.1006/bbrc.2000.2742

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  7 in total

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Authors:  Harald Janovjak; Daniel J Müller; Andrew D L Humphris
Journal:  Biophys J       Date:  2004-12-01       Impact factor: 4.033

2.  Frequency modulation atomic force microscopy reveals individual intermediates associated with each unfolded I27 titin domain.

Authors:  Michael J Higgins; John E Sader; Suzanne P Jarvis
Journal:  Biophys J       Date:  2005-10-28       Impact factor: 4.033

3.  Entropy and barrier-controlled fluctuations determine conformational viscoelasticity of single biomolecules.

Authors:  Bhavin S Khatri; Masaru Kawakami; Katherine Byrne; D Alastair Smith; Tom C B McLeish
Journal:  Biophys J       Date:  2006-12-08       Impact factor: 4.033

4.  Poly(N-vinyl-2-pyrrolidone) elution from polysulfone dialysis membranes by varying solvent and wall shear stress.

Authors:  Koki Namekawa; Masato Matsuda; Makoto Fukuda; Ami Kaneko; Kiyotaka Sakai
Journal:  J Artif Organs       Date:  2012-02-05       Impact factor: 1.731

5.  Hierarchies, multiple energy barriers, and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains.

Authors:  Theodor Ackbarow; Xuefeng Chen; Sinan Keten; Markus J Buehler
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-09       Impact factor: 11.205

6.  Protein high-force pulling simulations yield low-force results.

Authors:  Seth Lichter; Benjamin Rafferty; Zachary Flohr; Ashlie Martini
Journal:  PLoS One       Date:  2012-04-18       Impact factor: 3.240

7.  Spatially-resolved nanometer-scale measurement of cartilage extracellular matrix mobility.

Authors:  B D Partain; Q Zhang; M Unni; J Aldrich; C M Rinaldi-Ramos; S Narayanan; K D Allen
Journal:  Osteoarthritis Cartilage       Date:  2021-05-28       Impact factor: 6.576

  7 in total

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