Literature DB >> 10872466

De novo design and structural characterization of proteins and metalloproteins.

W F DeGrado1, C M Summa, V Pavone, F Nastri, A Lombardi.   

Abstract

De novo protein design has recently emerged as an attractive approach for studying the structure and function of proteins. This approach critically tests our understanding of the principles of protein folding; only in de novo design must one truly confront the issue of how to specify a protein's fold and function. If we truly understand proteins, it should be possible to design receptors, enzymes, and ion channels from scratch. Further, as this understanding evolves and is further refined, it should be possible to design proteins and biomimetic polymers with properties unprecedented in nature.

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Year:  1999        PMID: 10872466     DOI: 10.1146/annurev.biochem.68.1.779

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  120 in total

1.  De novo design and characterization of an apolar helical hairpin peptide at atomic resolution: Compaction mediated by weak interactions.

Authors:  U A Ramagopal; S Ramakumar; D Sahal; V S Chauhan
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

2.  A polar, solvent-exposed residue can be essential for native protein structure.

Authors:  R B Hill; W F DeGrado
Journal:  Structure       Date:  2000-05-15       Impact factor: 5.006

3.  Rational design of nascent metalloenzymes.

Authors:  D E Benson; M S Wisz; H W Hellinga
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

Review 4.  De novo design of helical bundles as models for understanding protein folding and function.

Authors:  R B Hill; D P Raleigh; A Lombardi; W F DeGrado
Journal:  Acc Chem Res       Date:  2000-11       Impact factor: 22.384

5.  Combinatorial approaches: a new tool to search for highly structured beta-hairpin peptides.

Authors:  Maria Teresa Pastor; Manuela López de la Paz; Emmanuel Lacroix; Luis Serrano; Enrique Pérez-Payá
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-08       Impact factor: 11.205

6.  Increasing protein stability using a rational approach combining sequence homology and structural alignment: Stabilizing the WW domain.

Authors:  X Jiang; J Kowalski; J W Kelly
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

7.  Length-dependent stability and strand length limits in antiparallel beta -sheet secondary structure.

Authors:  H E Stanger; F A Syud; J F Espinosa; I Giriat; T Muir; S H Gellman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-02       Impact factor: 11.205

8.  Design and development of a catalytic ribonucleoprotein.

Authors:  S Atsumi; Y Ikawa; H Shiraishi; T Inoue
Journal:  EMBO J       Date:  2001-10-01       Impact factor: 11.598

9.  BetaCore, a designed water soluble four-stranded antiparallel beta-sheet protein.

Authors:  Natàlia Carulla; Clare Woodward; George Barany
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

10.  Short constrained peptides that inhibit HIV-1 entry.

Authors:  Samuel K Sia; Peter A Carr; Andrea G Cochran; Vladimir N Malashkevich; Peter S Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-04       Impact factor: 11.205

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