Literature DB >> 10851151

Engineering dioxygenases for efficient degradation of environmental pollutants.

K Furukawa1.   

Abstract

Dioxygenases have recently been engineered to improve their capabilities for environmental pollutant degradation. The techniques used to achieve this include in vitro DNA shuffling and subunit or domain exchanges between dioxygenases of different bacterial origins. Such evolved enzymes acquire novel and enhanced degradation capabilities of xenobiotic compounds, such as polychlorinated biphenyls, trichloroethylene and a variety of aromatic compounds. Hybrid strains in which the evolved genes are integrated into the chromosomal operons exhibit efficient degradation of xenobiotic chlorinated compounds.

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Year:  2000        PMID: 10851151     DOI: 10.1016/s0958-1669(00)00091-4

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  28 in total

1.  eCodonOpt: a systematic computational framework for optimizing codon usage in directed evolution experiments.

Authors:  Gregory L Moore; Costas D Maranas
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

2.  Epoxide formation on the aromatic B ring of flavanone by biphenyl dioxygenase of Pseudomonas pseudoalcaligenes KF707.

Authors:  Jaehong Han; Song-Young Kim; Jihyun Jung; Yoongho Lim; Joong-Hoon Ahn; Su-Il Kim; Hor-Gil Hur
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

3.  Crystal structure of the terminal oxygenase component of cumene dioxygenase from Pseudomonas fluorescens IP01.

Authors:  Xuesong Dong; Shinya Fushinobu; Eriko Fukuda; Tohru Terada; Shugo Nakamura; Kentaro Shimizu; Hideaki Nojiri; Toshio Omori; Hirofumi Shoun; Takayoshi Wakagi
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

Review 4.  Laboratory-directed protein evolution.

Authors:  Ling Yuan; Itzhak Kurek; James English; Robert Keenan
Journal:  Microbiol Mol Biol Rev       Date:  2005-09       Impact factor: 11.056

5.  IPRO: an iterative computational protein library redesign and optimization procedure.

Authors:  Manish C Saraf; Gregory L Moore; Nina M Goodey; Vania Y Cao; Stephen J Benkovic; Costas D Maranas
Journal:  Biophys J       Date:  2006-03-02       Impact factor: 4.033

6.  Determination of the active site of Sphingobium chlorophenolicum 2,6-dichlorohydroquinone dioxygenase (PcpA).

Authors:  Timothy E Machonkin; Patrick L Holland; Kristine N Smith; Justin S Liberman; Adriana Dinescu; Thomas R Cundari; Sara S Rocks
Journal:  J Biol Inorg Chem       Date:  2010-03       Impact factor: 3.358

7.  Structural, spectroscopic, and electrochemical properties of nonheme Fe(II)-hydroquinonate complexes: synthetic models of hydroquinone dioxygenases.

Authors:  Amanda E Baum; Heaweon Park; Denan Wang; Sergey V Lindeman; Adam T Fiedler
Journal:  Dalton Trans       Date:  2012-10-21       Impact factor: 4.390

Review 8.  Molecular perspectives and recent advances in microbial remediation of persistent organic pollutants.

Authors:  Jaya Chakraborty; Surajit Das
Journal:  Environ Sci Pollut Res Int       Date:  2016-05-28       Impact factor: 4.223

9.  Nuclear Resonance Vibrational Spectroscopy Definition of O2 Intermediates in an Extradiol Dioxygenase: Correlation to Crystallography and Reactivity.

Authors:  Kyle D Sutherlin; Yuko Wasada-Tsutsui; Michael M Mbughuni; Melanie S Rogers; Kiyoung Park; Lei V Liu; Yeonju Kwak; Martin Srnec; Lars H Böttger; Mathieu Frenette; Yoshitaka Yoda; Yasuhiro Kobayashi; Masayuki Kurokuzu; Makina Saito; Makoto Seto; Michael Hu; Jiyong Zhao; E Ercan Alp; John D Lipscomb; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2018-11-26       Impact factor: 15.419

Review 10.  Recent advances in petroleum microbiology.

Authors:  Jonathan D Van Hamme; Ajay Singh; Owen P Ward
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

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