Literature DB >> 10846592

The relation between baseline HIV drug resistance and response to antiretroviral therapy: re-analysis of retrospective and prospective studies using a standardized data analysis plan.

V DeGruttola1, L Dix, R D'Aquila, D Holder, A Phillips, M Ait-Khaled, J Baxter, P Clevenbergh, S Hammer, R Harrigan, D Katzenstein, R Lanier, M Miller, M Para, S Yerly, A Zolopa, J Murray, A Patick, V Miller, S Castillo, L Pedneault, J Mellors.   

Abstract

To assess the relation between resistance to antiretroviral drugs for treatment of HIV-1 infection and virological response to therapy, results from 12 different studies were re-analysed according to a standard data analysis plan. These studies included nine clinical trials and three observational cohorts. The primary end-point in our analyses was virological failure by week 24. Baseline factors that were investigated as predictors of virological failure were plasma HIV-1 RNA, the number and type of new antiretroviral drugs in the regimen, and viral susceptibility to the drugs in the regimen, determined by genotyping or phenotyping methods. These analyses confirmed the importance of both genotypic and phenotypic drug resistance as predictors of virological failure, whether these factors were analysed separately or adjusted for other baseline confounding factors. In most of the re-analysed studies, the odds of virological failure were reduced by about twofold for each additional drug in the regimen to which the patient's virus was sensitive by genotyping methods, and by about two- to threefold for each additional drug that was sensitive by phenotyping.

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Year:  2000        PMID: 10846592     DOI: 10.1177/135965350000500112

Source DB:  PubMed          Journal:  Antivir Ther        ISSN: 1359-6535


  63 in total

1.  ACTG (AIDS Clinical Trials Group) 384: a strategy trial comparing consecutive treatments for HIV-1.

Authors:  L M Smeaton; V DeGruttola; G K Robbins; R W Shafer
Journal:  Control Clin Trials       Date:  2001-04

2.  Accuracy of the TRUGENE HIV-1 genotyping kit.

Authors:  Robert M Grant; Daniel R Kuritzkes; Victoria A Johnson; John W Mellors; John L Sullivan; Ronald Swanstrom; Richard T D'Aquila; Mark Van Gorder; Mark Holodniy; Robert M Lloyd; Caroline Reid; Gillian F Morgan; Dean L Winslow
Journal:  J Clin Microbiol       Date:  2003-04       Impact factor: 5.948

3.  Automating HIV drug resistance genotyping with RECall, a freely accessible sequence analysis tool.

Authors:  Conan K Woods; Chanson J Brumme; Tommy F Liu; Celia K S Chui; Anna L Chu; Brian Wynhoven; Tom A Hall; Christina Trevino; Robert W Shafer; P Richard Harrigan
Journal:  J Clin Microbiol       Date:  2012-03-07       Impact factor: 5.948

4.  Diversity and complexity of HIV-1 drug resistance: a bioinformatics approach to predicting phenotype from genotype.

Authors:  Niko Beerenwinkel; Barbara Schmidt; Hauke Walter; Rolf Kaiser; Thomas Lengauer; Daniel Hoffmann; Klaus Korn; Joachim Selbig
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

5.  Geno2pheno: Estimating phenotypic drug resistance from HIV-1 genotypes.

Authors:  Niko Beerenwinkel; Martin Däumer; Mark Oette; Klaus Korn; Daniel Hoffmann; Rolf Kaiser; Thomas Lengauer; Joachim Selbig; Hauke Walter
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

6.  Surveillance of transmitted drug-resistant HIV among young pregnant women in Ouagadougou, Burkina Faso.

Authors:  Antoine Somda; Lassana Sangare; Monique Soro; Saydou Yameogo; Babou Bazie; Françoise Bigirimana; Silvia Bertagnolio; Martine Peeters; Fatima Mouacha; Ana Maria Rivera; Michael R Jordan; Marie-Joseph Sanou
Journal:  Clin Infect Dis       Date:  2012-05       Impact factor: 9.079

7.  Prevalence of transmitted HIV drug resistance among newly diagnosed antiretroviral therapy-naive pregnant women in Lilongwe and Blantyre, Malawi.

Authors:  Nellie Wadonda-Kabondo; Richard Banda; Kundai Moyo; Maurice M'bang'ombe; Mabvuto Chiwaula; Carol Porter; Michael R Jordan
Journal:  Clin Infect Dis       Date:  2012-05       Impact factor: 9.079

8.  A Guide to HIV-1 Reverse Transcriptase and Protease Sequencing for Drug Resistance Studies.

Authors:  Robert W Shafer; Kathryn Dupnik; Mark A Winters; Susan H Eshleman
Journal:  HIV Seq Compend       Date:  2001

9.  Clinical evaluation of the potential utility of computational modeling as an HIV treatment selection tool by physicians with considerable HIV experience.

Authors:  Brendan A Larder; Andrew Revell; Joann M Mican; Brian K Agan; Marianne Harris; Carlo Torti; Ilaria Izzo; Julia A Metcalf; Migdalia Rivera-Goba; Vincent C Marconi; Dechao Wang; Daniel Coe; Brian Gazzard; Julio Montaner; H Clifford Lane
Journal:  AIDS Patient Care STDS       Date:  2011-01       Impact factor: 5.078

10.  Evaluation of the editing process in human immunodeficiency virus type 1 genotyping.

Authors:  Diana D Huang; Susan H Eshleman; Donald J Brambilla; Paul E Palumbo; James W Bremer
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

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