Literature DB >> 10836266

Self-programmable, self-assembling two-dimensional genetic matter.

S J Sowerby1, P A Stockwell, W M Heckl, G B Petersen.   

Abstract

Putative two-dimensional coding systems can be constructed from aqueous solutions of purine and pyrimidine nucleic acid bases evaporated at moderate temperatures on the surfaces of inorganic solids. The resultant structures are monolayers which are formed spontaneously by molecular self-assembly and they have been observed with molecular resolution by scanning tunnelling microscopy (STM). When formed from solutions of a single base, the monolayers of adenine and uracil have crystalline characteristics and the STM images can be interpreted in terms of the geometrical placement of planar arranged molecules that interact laterally by intermolecular hydrogen bonding. When formed from solutions containing a mixture of adenine and uracil, the monolayers have aperiodic structures. Small crystalline domains within these monolayers can be interpreted in terms of the single phase configurations of the molecules and the remaining aperiodic structures can presumably be interpreted, geometrically, in terms of the 21 theoretically possible adenine-adenine, uracil-uracil and adenine-uracil hydrogen bonding interactions. We propose that combinatorial arrangements of planar arranged purine and pyrimidine bases could provide the necessary complexity to act as a primitive genetic mechanism and may have relevance to the origin of life.

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Year:  2000        PMID: 10836266     DOI: 10.1023/a:1006616725062

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  23 in total

1.  Scanning tunnelling microscopy and molecular modelling of xanthine monolayers self-assembled at the solid-liquid interface: relevance to the origin of life.

Authors:  S J Sowerby; G B Petersen
Journal:  Orig Life Evol Biosph       Date:  1999-12       Impact factor: 1.950

Review 2.  HCN and chemical evolution: the possible role of cyano compounds in prebiotic synthesis.

Authors:  J P Ferris; W J Hagan
Journal:  Tetrahedron       Date:  1984       Impact factor: 2.457

3.  Periodical changes of amino acid reactivity within the genetic code.

Authors:  I Z Siemion; P Stefanowicz
Journal:  Biosystems       Date:  1992       Impact factor: 1.973

4.  ADSORPTION OF DNA COMPONENTS ON THE MERCURY ELECTRODE.

Authors:  V VETTERL
Journal:  Experientia       Date:  1965-01-15

5.  Oligomerization of ribonucleotides on montmorillonite: reaction of the 5'-phosphorimidazolide of adenosine.

Authors:  J P Ferris; G Ertem
Journal:  Science       Date:  1992-09-04       Impact factor: 47.728

6.  Tunneling microscopy of 2H-MoS2: A compound semiconductor surface.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-03-15

7.  RNA evolution and the origins of life.

Authors:  G F Joyce
Journal:  Nature       Date:  1989-03-16       Impact factor: 49.962

8.  Crystal and molecular structure of a hydrogen-bonded complex containing adenine and hypoxanthine derivatives: 9-ethyl-8-bromoadenine-9-ethyl-8-bromohypoxanthine.

Authors:  T D Sakore; H M Sobell
Journal:  J Mol Biol       Date:  1969-07-14       Impact factor: 5.469

9.  Synthesis of long prebiotic oligomers on mineral surfaces.

Authors:  J P Ferris; A R Hill; R Liu; L E Orgel
Journal:  Nature       Date:  1996-05-02       Impact factor: 49.962

10.  A multivariate study of the relationship between the genetic code and the physical-chemical properties of amino acids.

Authors:  M Sjöström; S Wold
Journal:  J Mol Evol       Date:  1985       Impact factor: 2.395

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  5 in total

1.  Differential adsorption of nucleic acid bases: Relevance to the origin of life.

Authors:  S J Sowerby; C A Cohn; W M Heckl; N G Holm
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

2.  Primordial coding of amino acids by adsorbed purine bases.

Authors:  Stephen J Sowerby; George B Petersen; Nils G Holm
Journal:  Orig Life Evol Biosph       Date:  2002-02       Impact factor: 1.950

3.  Emergence of self-reproduction in cooperative chemical evolution of prebiological molecules.

Authors:  Maya Fishkis
Journal:  Orig Life Evol Biosph       Date:  2010-09-01       Impact factor: 1.950

4.  Modulation of adenosine 5'-monophosphate adsorption onto aqueous resident pyrite: potential mechanisms for prebiotic reactions.

Authors:  M Pontes-Buarques; A C Tessis; J A Bonapace; M B Monte; G Cortés-Lopez; F De Souza-Barros; A Vieyra
Journal:  Orig Life Evol Biosph       Date:  2001 Aug-Oct       Impact factor: 1.950

5.  Steps towards the formation of a protocell: the possible role of short peptides.

Authors:  Maya Fishkis
Journal:  Orig Life Evol Biosph       Date:  2007-09-14       Impact factor: 1.950

  5 in total

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