Literature DB >> 10833394

Overexpression in Escherichia coli, purification, and characterization of Sphingomonas sp. A1 alginate lyases.

H J Yoon1, W Hashimoto, O Miyake, M Okamoto, B Mikami, K Murata.   

Abstract

A bacterium Sphingomonas sp. A1 produces three kinds of alginate lyases [A1-I (66 kDa), A1-II (25 kDa), and A1-III (40 kDa)] from a single precursor, through posttranslational processing. Overexpression systems for these alginate lyases were constructed in Escherichia coli cells by controlling of the lyase genes under T7 promoter and terminator. Expression levels of A1-I, A1-II, and A1-III in E. coli cells were 3.50, 3.04, and 2.13 kU/liter of culture, respectively, and were over 10-fold higher than those in Sphingomonas sp. A1 cells. Purified A1-I, A1-II, and A1-III from E. coli cells were monomeric enzymes with molecular masses of 63, 25, and 40 kDa, respectively. The depolymerization pattern of alginate with A1-I and A1-II indicated that both enzymes cleaved the glycosidic bond of the polymer endolytically and by beta-elimination reaction. A1-II preferred polyguluronate rather than polymannuronate and released tri- and tetrasaccharides, which have unsaturated uronyl residues at the nonreducing terminal, from alginate as the major final products. A1-I acted equally on both homopolymers and produced di- and trisaccharides as the final products. Copyright 2000 Academic Press.

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Year:  2000        PMID: 10833394     DOI: 10.1006/prep.2000.1226

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  34 in total

1.  Origin and diversity of alginate lyases of families PL-5 and -7 in Sphingomonas sp. strain A1.

Authors:  Osamu Miyake; Akihito Ochiai; Wataru Hashimoto; Kousaku Murata
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

2.  Crystal structure of exotype alginate lyase Atu3025 from Agrobacterium tumefaciens.

Authors:  Akihito Ochiai; Masayuki Yamasaki; Bunzo Mikami; Wataru Hashimoto; Kousaku Murata
Journal:  J Biol Chem       Date:  2010-05-27       Impact factor: 5.157

3.  Crystallization and preliminary crystallographic analysis of the cell-surface alginate-binding protein Algp7 isolated from Sphingomonas sp. A1.

Authors:  Wataru Hashimoto; Akihito Ochiai; Jinshan He; Takafumi Itoh; Bunzo Mikami; Kousaku Murata
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-04-24

Review 4.  Bacterial supersystem for alginate import/metabolism and its environmental and bioenergy applications.

Authors:  Wataru Hashimoto; Shigeyuki Kawai; Kousaku Murata
Journal:  Bioeng Bugs       Date:  2009-10-14

5.  Polysaccharide lyase: molecular cloning, sequencing, and overexpression of the xanthan lyase gene of Bacillus sp. strain GL1.

Authors:  W Hashimoto; H Miki; N Tsuchiya; H Nankai; K Murata
Journal:  Appl Environ Microbiol       Date:  2001-02       Impact factor: 4.792

6.  Crystallization and preliminary X-ray analysis of alginate importer from Sphingomonas sp. A1.

Authors:  Yukie Maruyama; Takafumi Itoh; Yu Nishitani; Bunzo Mikami; Wataru Hashimoto; Kousaku Murata
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-02-23

7.  Cloning and characterization of a novel oligoalginate lyase from a newly isolated bacterium Sphingomonas sp. MJ-3.

Authors:  Hwan Hee Park; Natania Kam; Eun Yeol Lee; Hee Sook Kim
Journal:  Mar Biotechnol (NY)       Date:  2011-08-10       Impact factor: 3.619

8.  A polysaccharide lyase from Stenotrophomonas maltophilia with a unique, pH-regulated substrate specificity.

Authors:  Logan C MacDonald; Bryan W Berger
Journal:  J Biol Chem       Date:  2013-11-20       Impact factor: 5.157

9.  Alginate-dependent gene expression mechanism in Sphingomonas sp. strain A1.

Authors:  Chie Hayashi; Ryuichi Takase; Keiko Momma; Yukie Maruyama; Kousaku Murata; Wataru Hashimoto
Journal:  J Bacteriol       Date:  2014-05-09       Impact factor: 3.490

10.  Defluviitalea phaphyphila sp. nov., a Novel Thermophilic Bacterium That Degrades Brown Algae.

Authors:  Shi-Qi Ji; Bing Wang; Ming Lu; Fu-Li Li
Journal:  Appl Environ Microbiol       Date:  2015-11-20       Impact factor: 4.792

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